{"id":"W1593858553","doi":"10.1128/jb.00746-09","title":"Evidence that human Chlamydia pneumoniae was zoonotically acquired.","year":2009,"lang":"en","type":"article","venue":"PubMed","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Chlamydiaceae; Human pathogen; Chlamydia; Pseudogene; Chlamydophila pneumoniae; Phylogenetic tree; Genetics; Pathogen; Virology; Genome; Phascolarctos cinereus; Gene; Microbiology; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054055,0.0001501239,0.0001099092,0.0004763487,0.0004302606,0.0004874506,0.0001782684,0.0003863405,0.005308538],"category_scores_gemma":[0.001175305,0.0001036762,0.0001113809,0.0004481688,0.0005997582,0.000204769,0.0002183776,0.0003738304,0.0004979368],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000373298,"about_ca_system_score_gemma":0.0006629454,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01617226,"about_ca_topic_score_gemma":0.01092526,"domain_scores_codex":[0.9997076,0.00007103266,0.00001585763,0.00006353315,0.00008017537,0.00006176277],"domain_scores_gemma":[0.9992835,0.0001937281,0.000162561,0.00008292934,0.0001961499,0.00008105156],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007944418,0.0001108979,0.8410243,0.0016599,0.0002069437,0.002015968,0.002853285,0.00005803379,0.03158351,0.004563875,0.01046118,0.1046676],"study_design_scores_gemma":[0.00002109375,0.000237489,0.9003329,0.0003616747,0.0001369739,0.007093697,0.001402504,0.00009476465,0.005614103,0.0005567832,0.08412777,0.00002024241],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8991203,0.04255728,0.001932398,0.004738636,0.0006014212,0.00006750417,0.00389594,0.00006341455,0.04702314],"genre_scores_gemma":[0.9872788,0.006972367,0.0005991099,0.00090486,0.0001135259,0.000008045366,0.0008465797,0.000004449646,0.003272124],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01617226,"threshold_uncertainty_score":0.03215623,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08747347902048411,"score_gpt":0.3044795620720463,"score_spread":0.2170060830515622,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}