{"id":"W1595771770","doi":"10.1111/j.1365-313x.2005.02399.x","title":"Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation‐induced senescence in Arabidopsis","year":2005,"lang":"en","type":"article","venue":"The Plant Journal","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1066,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Max-Planck-Gesellschaft; Biotechnology and Biological Sciences Research Council; Deutsche Forschungsgemeinschaft; University of East Anglia","keywords":"Senescence; Biology; Transcriptome; Arabidopsis; Gene expression; Jasmonic acid; Cell biology; Gene; Gene expression profiling; Genetics; Mutant","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006523327,0.0001715394,0.0003722288,0.0002499601,0.0001591538,0.00006585912,0.0001903745,0.0000867971,0.0000126692],"category_scores_gemma":[0.00002559844,0.000117038,0.00005601077,0.0002765547,0.00005047921,0.00001826197,0.00005510446,0.0002263076,8.253973e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002885751,"about_ca_system_score_gemma":0.0000523706,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002388548,"about_ca_topic_score_gemma":0.0001493657,"domain_scores_codex":[0.9985675,0.0002725984,0.0004378574,0.0002798768,0.0002111793,0.0002309955],"domain_scores_gemma":[0.9995102,0.00008465805,0.0001759916,0.00009149561,0.00003034165,0.000107296],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000640296,0.00002389127,0.1614301,0.000002734605,0.0001233098,0.000008381921,0.001194959,0.0002213592,0.8366425,8.52088e-7,0.00006624014,0.0002216425],"study_design_scores_gemma":[0.0006918745,0.00005587497,0.2672265,0.00009880607,0.0001520851,0.00007462618,0.001444585,0.00195618,0.7279136,0.00006047013,0.00004421258,0.000281228],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975598,0.0003055021,0.001745032,0.0001625568,0.00001325116,0.00009825084,0.0000805521,0.000003264677,0.00003174872],"genre_scores_gemma":[0.9973509,0.0006595531,0.001730447,0.00005852206,0.00007753056,0.000006230212,0.0000889214,0.000005518873,0.00002243374],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1087289,"threshold_uncertainty_score":0.477267,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05415711795825242,"score_gpt":0.257525074985653,"score_spread":0.2033679570274006,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}