{"id":"W1598335893","doi":"10.1111/1462-2920.12196","title":"Homoserine catabolism by <i> <scp>R</scp> hizobium leguminosarum </i> bv. <i>viciae</i> 3841 requires a plasmid‐borne gene cluster that also affects competitiveness for nodulation","year":2013,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Homoserine; Rhizobium leguminosarum; Biology; Agrobacterium tumefaciens; Gene cluster; Plasmid; Gene; Mutant; Microbiology; Operon; Rhizobiaceae; Biochemistry; Genetics; Bacteria; Symbiosis; Quorum sensing; Virulence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001081818,0.0003583963,0.0001944559,0.0001700249,0.00009726397,0.0002263951,0.0001760879,0.0001347886,0.0007177493],"category_scores_gemma":[0.000128454,0.0001451273,0.0001943143,0.0001339334,0.0001045775,0.0001209608,0.0002215528,0.0003161109,0.0002852978],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004578919,"about_ca_system_score_gemma":0.00023023,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002108897,"about_ca_topic_score_gemma":0.002467532,"domain_scores_codex":[0.999863,0.0000256642,0.00001021317,0.0000246374,0.00003546994,0.00004082756],"domain_scores_gemma":[0.9998668,0.00001870545,0.00004746131,0.00001742938,0.00001203754,0.00003749947],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002328482,0.000006320456,0.0001866898,0.000006523956,0.000001462474,0.000009794366,0.000005680422,0.00001381132,0.9994981,0.00001387347,0.00000460102,0.0002298807],"study_design_scores_gemma":[0.00002177945,0.0003082888,0.03252048,0.000007280086,0.00002552293,0.0005512222,0.00007326735,0.001642211,0.9633642,0.00005231025,0.001426555,0.000006735207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988217,0.0001089337,0.0005599067,0.00001851786,0.000002358566,0.000005832709,0.0001241566,0.00002281225,0.0003357544],"genre_scores_gemma":[0.9969972,0.00008062086,0.0009740706,0.00001293262,0.000001850303,0.000008263657,0.0009068887,0.00002136536,0.0009968063],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002108897,"threshold_uncertainty_score":0.004193187,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006248479664029895,"score_gpt":0.1746844816617235,"score_spread":0.1684360019976936,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}