{"id":"W1600008037","doi":"10.1002/9780470151808.sc01b01s2","title":"Proteomic Analysis of Pluripotent Stem Cells","year":2007,"lang":"en","type":"article","venue":"Current Protocols in Stem Cell Biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"","keywords":"Proteomics; Embryonic stem cell; Biology; Peptide mass fingerprinting; Protein mass spectrometry; Mass spectrometry; Tandem mass spectrometry; Induced pluripotent stem cell; Proteome; Electrospray ionization; Bottom-up proteomics; Computational biology; Molecular biology; Chemistry; Chromatography; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004614173,0.0002314139,0.0005293214,0.0002977173,0.0000459998,0.000008861238,0.000474542,0.0002325588,0.0001215758],"category_scores_gemma":[0.000002125193,0.0002138633,0.0002023085,0.0007060193,0.0001263713,0.00003976134,0.0001562586,0.000344634,0.00001093728],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001460706,"about_ca_system_score_gemma":0.00004750356,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001133736,"about_ca_topic_score_gemma":0.000006770848,"domain_scores_codex":[0.9980281,0.00003526033,0.0008845103,0.0005183063,0.0001083681,0.0004254545],"domain_scores_gemma":[0.998584,0.00007691639,0.000516932,0.0006543119,0.00008337256,0.0000844867],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009057075,0.0003652944,0.01647071,0.0003814363,0.0000516915,0.000001285581,0.00007736196,0.000181069,0.9254614,0.001389007,0.00001326611,0.0555169],"study_design_scores_gemma":[0.0004509833,0.00005352919,0.0001373068,0.00008952794,0.00005822746,4.060364e-7,0.00003881276,0.0004006745,0.9786301,0.0004577928,0.01946004,0.0002225584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8578194,0.0002063716,0.08329681,0.00001692828,0.00006602872,0.05330536,0.0001899212,0.0001830002,0.004916133],"genre_scores_gemma":[0.8656381,0.00005463865,0.006734957,0.00001097766,0.00006581105,0.1270933,0.00006112473,0.00003341468,0.0003076499],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07656185,"threshold_uncertainty_score":0.8721091,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03479436022688994,"score_gpt":0.3492755936024775,"score_spread":0.3144812333755875,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}