{"id":"W163921889","doi":"10.4137/ebo.s652","title":"Maximum Gene-Support Tree","year":2008,"lang":"en","type":"article","venue":"Evolutionary Bioinformatics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum; Agriculture and Agri-Food Canada","funders":"","keywords":"Phylogenetic tree; Gene; Biology; Genome; Phylogenetics; Phylogenetic network; Tree (set theory); Tree rearrangement; Orthologous Gene; Genetics; Tree of life (biology); Phylogenomics; Evolutionary biology; Clade; Computational phylogenetics; Computational biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007225209,0.0001576208,0.0001261226,0.00004461551,0.0002416127,0.000006439734,0.0001824467,0.0001034999,0.00003363183],"category_scores_gemma":[0.00002721846,0.0001502998,0.0001028988,0.00007693071,0.0001457156,0.000002259136,0.0001588105,0.00005691357,0.0001608152],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001817951,"about_ca_system_score_gemma":0.0001297785,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003765659,"about_ca_topic_score_gemma":0.000003549515,"domain_scores_codex":[0.9991328,0.00001212624,0.0002925802,0.0001477537,0.0001523597,0.0002623847],"domain_scores_gemma":[0.9994186,0.00000652651,0.00008405913,0.0003205731,0.00008457843,0.00008563329],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002836082,0.0004889424,0.1063467,0.000135556,0.0007218164,0.00005847336,0.002058545,0.00174081,0.2265755,0.0009880532,0.6412859,0.01931618],"study_design_scores_gemma":[0.001548152,0.0009758493,0.2215392,0.00000845215,0.00004649277,0.001268015,0.0003904118,0.002623619,0.02583273,0.0008657644,0.7439538,0.0009475608],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9534454,0.001378501,0.003724845,0.0002184713,0.0004793138,0.0002565311,0.000119208,0.00002065913,0.04035705],"genre_scores_gemma":[0.9518008,0.001398596,0.04278836,0.0006538029,0.0003673447,0.0000229955,0.0002741493,0.00002184987,0.002672172],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2007428,"threshold_uncertainty_score":0.6129046,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01329144075540582,"score_gpt":0.2112656708091148,"score_spread":0.197974230053709,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}