{"id":"W1641629353","doi":"10.1139/w11-039","title":"Matrix-assisted laser desorption ionization time-of-flight mass spectrometry and database for identification of <i>Legionella</i> species <sup>1</sup>This study was presented in part at the 110th American Society for Microbiology Annual Meeting, 23–27 May 2010, San Diego, California.","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Vanderbilt University Medical Center","keywords":"Legionella; Legionella pneumophila; Microbiology; Biology; Legionnaires' disease; Bacteria; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001052318,0.0001592199,0.0003405294,0.0001625794,0.0001337175,0.00001662256,0.0002481863,0.0001464539,0.00007111616],"category_scores_gemma":[0.0003456044,0.0001346119,0.0001563206,0.0001987817,0.0004551159,0.00001494093,0.0000450977,0.00009978856,0.000003087541],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007810632,"about_ca_system_score_gemma":0.0002136911,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006795375,"about_ca_topic_score_gemma":0.01140742,"domain_scores_codex":[0.9983194,0.0002468334,0.0008247176,0.0003053255,0.00003236805,0.0002713394],"domain_scores_gemma":[0.9981799,0.00009510703,0.0008502087,0.0002844539,0.000487021,0.0001033678],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002320286,0.00007045202,0.03867359,0.00004137039,0.0001208167,8.302993e-7,0.000687748,0.00002149166,0.9340249,0.000005048872,0.02606106,0.00006064944],"study_design_scores_gemma":[0.003422428,0.001703298,0.03022673,0.0000972452,0.0003845478,0.0002668891,0.006815722,0.0002240813,0.9162191,0.00003855767,0.04008994,0.0005114829],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956142,0.000326843,0.0008714889,0.0002051726,0.0002133708,0.0006215469,0.002136214,0.000002870927,0.000008308638],"genre_scores_gemma":[0.9950351,0.00006154053,0.00185251,0.00007624171,0.0001260261,0.00001415708,0.00163125,0.00002159339,0.001181544],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01780584,"threshold_uncertainty_score":0.6365606,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02057280751433735,"score_gpt":0.2425863739951773,"score_spread":0.22201356648084,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}