{"id":"W1645887691","doi":"10.1099/ijsem.0.000520","title":"Rarimicrobium hominis gen. nov., sp. nov., representing the fifth genus in the phylum Synergistetes that includes human clinical isolates","year":2015,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; 16S ribosomal RNA; Microbiology; Phylogenetics; Clade; Taxonomy (biology); Ribosomal RNA; Phylum; Genus; Strain (injury); Gene sequence; Bacteria; Gene; Zoology; Genetics; Anatomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001916809,0.0001679831,0.0003717419,0.00008212525,0.0001337969,0.00005156138,0.0007419406,0.000136703,0.000005109658],"category_scores_gemma":[0.0003419374,0.00009648049,0.0001787238,0.00005173228,0.0003205925,0.000005960541,0.0003258401,0.0001969221,0.000004762637],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002842539,"about_ca_system_score_gemma":0.0001009221,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004215855,"about_ca_topic_score_gemma":0.00003756373,"domain_scores_codex":[0.9980292,0.0005167268,0.0009188085,0.0002195969,0.0001222772,0.0001933928],"domain_scores_gemma":[0.9984358,0.0002490174,0.0006592281,0.0002430909,0.0003663201,0.00004653888],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004102661,0.0004785378,0.1951599,0.0007206708,0.002151011,0.00009124997,0.00409681,0.0003552757,0.7693326,0.0005797957,0.02648483,0.00013899],"study_design_scores_gemma":[0.02095269,0.005695869,0.6589558,0.007910653,0.001693847,0.060508,0.06571057,0.001073699,0.02373437,0.01077429,0.1396638,0.003326373],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9837127,0.0133555,0.0001180788,0.001370146,0.0009527487,0.0002458958,0.00002687484,0.000001467448,0.0002165907],"genre_scores_gemma":[0.9978857,0.0005242262,0.0003722706,0.0004111364,0.0006633545,0.00001148204,0.00002272866,0.00001053417,0.00009854363],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7455983,"threshold_uncertainty_score":0.393436,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05961667287111737,"score_gpt":0.3171835742282347,"score_spread":0.2575669013571174,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}