{"id":"W1653408305","doi":"10.3389/fmicb.2015.00827","title":"Metabolomics reveals differences of metal toxicity in cultures of Pseudomonas pseudoalcaligenes KF707 grown on different carbon sources","year":2015,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":75,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates - Health Solutions","keywords":"Metal toxicity; Environmental chemistry; Pollutant; Fumarase; Biphenyl; Metabolomics; Bacteria; Metabolism; Toxicity; Chemistry; Carbon fibers; Catabolism; Microbial metabolism; Metal; Biochemistry; Biology; Enzyme; Organic chemistry; Heavy metals; Materials science; Chromatography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003876274,0.0002190162,0.000657448,0.0001496074,0.00001533058,0.000004500954,0.0003676825,0.0002318333,0.00007572403],"category_scores_gemma":[0.00009598392,0.0001572059,0.00008554738,0.0002524621,0.000472154,0.0000423477,0.0001450183,0.0001511336,0.000005671045],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000124441,"about_ca_system_score_gemma":0.00001576655,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004586102,"about_ca_topic_score_gemma":0.000658663,"domain_scores_codex":[0.9983332,0.000308985,0.0005797946,0.0003578942,0.0001143769,0.0003057759],"domain_scores_gemma":[0.999394,0.00004219617,0.0002833784,0.0001944957,0.00001501764,0.0000709171],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009558702,0.0001668456,0.4414225,0.000006583346,0.00001426857,0.000001136197,0.0005063005,0.00004084195,0.556604,0.00001205537,0.0009743884,0.000155462],"study_design_scores_gemma":[0.0009488385,0.0002450479,0.1959262,0.00002697699,0.00002016038,0.000004007929,0.0005922393,0.00005565836,0.8010839,0.0004877706,0.0003760734,0.0002331282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982364,0.0003832075,0.00002573609,0.0001240781,0.0005644367,0.0002341241,0.00008239142,0.0000085113,0.0003411184],"genre_scores_gemma":[0.9984619,0.0001675039,0.001092741,0.0001170682,0.0000181743,0.000004220765,0.00002501077,0.000007891462,0.0001054648],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2454963,"threshold_uncertainty_score":0.641067,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01548346851346414,"score_gpt":0.2289507527861841,"score_spread":0.21346728427272,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}