{"id":"W1670635990","doi":"10.1099/00221287-147-11-3015","title":"Conserved amino acid residues found in a predicted cytosolic domain of the lipopolysaccharide biosynthetic protein WecA are implicated in the recognition of UDP-N-acetylglucosamine","year":2001,"lang":"en","type":"article","venue":"Microbiology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"","keywords":"Biochemistry; Histidine; Biology; Transferase; Escherichia coli; Conserved sequence; Peptide sequence; Sequence motif; Mutant; Bacterial outer membrane; Amino acid; Enzyme; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003605576,0.0002350235,0.0004698432,0.00008628657,0.00005242738,0.000009982704,0.0005731371,0.0003537974,0.0002813457],"category_scores_gemma":[0.0003616265,0.0001614486,0.0001267575,0.0004927306,0.0004747509,0.00003365313,0.0001115099,0.0003223652,0.000004222388],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007402139,"about_ca_system_score_gemma":0.00007244448,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000542777,"about_ca_topic_score_gemma":0.001584513,"domain_scores_codex":[0.9982319,0.0002703331,0.0007058171,0.0003613536,0.00007135664,0.0003592717],"domain_scores_gemma":[0.9985403,0.0002544159,0.0004344393,0.0006520724,0.00009095434,0.00002781533],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002993691,0.0002354883,0.007185441,0.0001820889,0.00003490476,0.00001374884,0.0005182814,0.000001596731,0.99128,0.000006269146,0.0000386111,0.0002042679],"study_design_scores_gemma":[0.0009045108,0.00003069793,0.00325248,0.0004339374,0.00002774453,0.0001593163,0.001107759,0.000008649212,0.9933783,0.0003228427,0.000211892,0.0001618269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997547,0.0002201563,0.000002417571,0.0008502785,0.00002396252,0.0003464376,0.000372355,0.00002511909,0.0006122435],"genre_scores_gemma":[0.9994588,0.00003875838,0.00004226768,0.00006990607,0.00003631914,0.000130258,0.0001257685,0.00001886398,0.00007904458],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00393296,"threshold_uncertainty_score":0.6583685,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01915510042935356,"score_gpt":0.2186576376288113,"score_spread":0.1995025371994577,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}