{"id":"W1728403685","doi":"10.1186/1742-4690-3-s1-s4","title":"HIV-1 subtype C viruses rapidly develop K65R","year":2006,"lang":"en","type":"article","venue":"Retrovirology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Virology; Human immunodeficiency virus (HIV); Medicine; Antibody; Computational biology; Biology; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001660488,0.0001870039,0.0002867002,0.0001541285,0.0001841499,0.00001090093,0.0002157518,0.0003176493,0.002605197],"category_scores_gemma":[0.00009431611,0.0001550543,0.00007286541,0.0001974408,0.0003221357,0.00005330074,0.00008908271,0.0002887955,0.0265306],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006780772,"about_ca_system_score_gemma":0.0001364825,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003777617,"about_ca_topic_score_gemma":0.0001564227,"domain_scores_codex":[0.9984359,0.0002501022,0.0002496427,0.0003506092,0.00004086641,0.0006728941],"domain_scores_gemma":[0.9993464,0.0001771763,0.0000688051,0.0003053007,0.00006969618,0.00003260201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006181957,0.0004653815,0.4304821,0.00001506079,0.0003347496,0.0001948298,0.00007529767,0.000007942355,0.4036708,0.006828087,0.1510652,0.006242341],"study_design_scores_gemma":[0.002443254,0.0005778315,0.2559976,0.00000419934,0.00003577241,0.0001901058,0.00002133203,0.000001039135,0.04998206,0.00052107,0.6899926,0.0002331152],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.978662,0.004113413,0.0002578432,0.0008087168,0.000399248,0.0002072101,0.0001140279,0.0001577065,0.01527988],"genre_scores_gemma":[0.987331,0.00006658632,0.0002023698,0.0003779295,0.00007726138,0.00003636218,0.0004934503,0.00002067811,0.0113943],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5389274,"threshold_uncertainty_score":0.9983066,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01441046914440298,"score_gpt":0.2506025121399738,"score_spread":0.2361920429955708,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}