{"id":"W1766136822","doi":"10.1371/journal.pone.0138162","title":"Transcriptome Analysis of Poplar during Leaf Spot Infection with Sphaerulina spp.","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Forest Service; Natural Resources Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Phenylpropanoid; Pathogen; Canker; Transcriptome; Botany; Host (biology); Inoculation; Magnoliaceae; Gene; Flavonoid biosynthesis; Woody plant; Salicaceae; Fungus; Horticulture; Gene expression; Microbiology; Genetics; Biosynthesis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000145394,0.0002540321,0.0004774796,0.0003331168,0.0003333665,0.0004592602,0.0001136393,0.0002476512,0.0005475262],"category_scores_gemma":[0.0001228013,0.0001709078,0.0004911883,0.0004316348,0.0001623945,0.0002912898,0.0002788627,0.0005135621,0.0002991576],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001877856,"about_ca_system_score_gemma":0.0001693691,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00082776,"about_ca_topic_score_gemma":0.001234551,"domain_scores_codex":[0.9998507,0.00001234325,0.000006605077,0.00006368365,0.00002936218,0.00003738193],"domain_scores_gemma":[0.9998943,0.00002538439,0.0000275891,0.000006100544,0.00002651611,0.00002023882],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009036433,0.0000117111,0.002072479,0.00008150901,0.00001423995,0.00006645995,0.000154234,0.00008651214,0.9961897,0.00002806512,0.00005622414,0.001148527],"study_design_scores_gemma":[0.00002099717,0.0007408776,0.6984608,0.00007454187,0.0002355312,0.0008481552,0.001315594,0.004365452,0.2819432,0.0003049095,0.01162046,0.00006960209],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901652,0.00183249,0.002087146,0.00006121519,0.00002768951,0.00002283035,0.004640275,0.00008548529,0.001077727],"genre_scores_gemma":[0.981355,0.001410533,0.002903368,0.0002235257,0.00002625191,0.0001005678,0.01127325,0.00006561003,0.002641918],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00082776,"threshold_uncertainty_score":0.001831651,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05064659214819005,"score_gpt":0.2139747375093459,"score_spread":0.1633281453611559,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}