{"id":"W1791412297","doi":"10.1128/jcm.38.2.513-520.2000","title":"Rapid Identification of Bacteria from Positive Blood Cultures by Fluorescence-Based PCR–Single-Strand Conformation Polymorphism Analysis of the 16S rRNA Gene","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Sciences Centre; University of Manitoba","funders":"","keywords":"Bacteremia; Single-strand conformation polymorphism; Biology; Blood culture; 16S ribosomal RNA; Microbiology; Bacteria; Pathogen; Polymerase chain reaction; Genetics; Gene; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008312808,0.0001174201,0.0004943778,0.00006547903,0.00004772765,0.00001660794,0.0003392675,0.0002775825,0.0002761856],"category_scores_gemma":[0.0005088146,0.00008431108,0.0005043392,0.0001852201,0.0003021176,0.00001278708,0.00002504551,0.0001512263,0.000001767237],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008369801,"about_ca_system_score_gemma":0.00009411013,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003512142,"about_ca_topic_score_gemma":0.00001260001,"domain_scores_codex":[0.9971953,0.0004979731,0.001922224,0.0001992076,0.00006994225,0.0001153721],"domain_scores_gemma":[0.9972868,0.0001535582,0.001766436,0.0003169952,0.0004197725,0.00005643443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004554186,0.0003648175,0.005458338,0.000005604659,0.0006534501,2.104664e-7,0.00005615408,0.00002593894,0.989132,0.000001450584,0.0003439257,0.003502665],"study_design_scores_gemma":[0.001017556,0.0003163254,0.1212165,0.0000225371,0.0006916925,0.000008002495,0.00002210214,0.00004324169,0.8756433,0.0000110372,0.0009281713,0.00007947074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981302,0.0003130108,0.0002422436,0.0002959195,0.0003158645,0.0001007643,0.0005772705,0.000002158051,0.00002254732],"genre_scores_gemma":[0.9979824,0.0002191755,0.0007315051,0.0001562701,0.0001394975,7.728099e-7,0.0007048078,0.000006155463,0.00005942385],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1157582,"threshold_uncertainty_score":0.3438106,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02032540506948356,"score_gpt":0.2892113467152765,"score_spread":0.2688859416457929,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}