{"id":"W1796681918","doi":"10.1128/jcm.02201-15","title":"High Incidence of Invasive Group A Streptococcus Disease Caused by Strains of Uncommon <i>emm</i> Types in Thunder Bay, Ontario, Canada","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University and Génome Québec Innovation Centre; Public Health Ontario; Hospital for Sick Children; Lakehead University; Mount Sinai Hospital; Thunder Bay Regional Health Sciences Centre; University of Toronto","funders":"Public Health Ontario","keywords":"Bay; Population; Outbreak; Incidence (geometry); Disease; Epidemiology; Medicine; Biology; Demography; Virology; Environmental health; Geography; Pathology; Archaeology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004579622,0.0001437399,0.0009299862,0.00009144724,0.00001287003,0.000002740735,0.0001279241,0.0001548428,0.0001427335],"category_scores_gemma":[0.000890639,0.0001034512,0.0001950466,0.0001412783,0.0002148945,0.00005534245,0.00004868897,0.0004388418,0.00000150014],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003039767,"about_ca_system_score_gemma":0.003470463,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.4108224,"about_ca_topic_score_gemma":0.9075503,"domain_scores_codex":[0.9978212,0.0002066997,0.001514885,0.0001698044,0.0001027943,0.0001846669],"domain_scores_gemma":[0.9976431,0.0005182169,0.000938003,0.0002081282,0.0003582307,0.0003343236],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008912822,0.001050113,0.9847341,0.00002926828,0.0002953383,0.0001797375,0.00004453429,0.00002982125,0.005655021,0.00003217816,0.006549481,0.0005091265],"study_design_scores_gemma":[0.007634514,0.00386933,0.983419,0.0003573216,0.0002755925,0.00006491852,0.0001172083,0.000001828302,0.001821699,0.0004034558,0.001923128,0.0001119993],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982463,0.0003204099,0.00001537617,0.0004627124,0.0004756449,0.0002614402,0.0001137796,0.000002401691,0.000101912],"genre_scores_gemma":[0.9992461,0.0000434166,0.0001679051,0.0003313701,0.00006968485,0.00000422704,0.00003808528,0.000008834677,0.00009037754],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4967279,"threshold_uncertainty_score":0.6156452,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04629277075048208,"score_gpt":0.3355985061306113,"score_spread":0.2893057353801292,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}