{"id":"W1802114667","doi":"10.1128/genomea.00768-15","title":"Draft Genome Sequence of Clavibacter michiganensis subsp. <i>nebraskensis</i> Strain DOAB 397, Isolated from an Infected Field Corn Plant in Manitoba, Canada","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Manitoba Canola Growers Association; Canadian Food Inspection Agency; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Génome Québec","keywords":"Clavibacter michiganensis; Biology; Whole genome sequencing; Pseudogene; Strain (injury); Genome; Sorghum; Pathogen; Gene; Microbiology; Genetics; Agronomy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002173805,0.0002968051,0.0004468799,0.00003016218,0.00009606311,0.00004649137,0.0004371537,0.0001418647,0.000150251],"category_scores_gemma":[0.00004145612,0.0001568046,0.00004901129,0.0003739477,0.00005458295,0.0002098022,0.0001595707,0.000182369,0.00001896732],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000193338,"about_ca_system_score_gemma":0.0001440886,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.4295389,"about_ca_topic_score_gemma":0.9050595,"domain_scores_codex":[0.9978615,0.0001451909,0.0005469899,0.0005033602,0.0003991632,0.0005437736],"domain_scores_gemma":[0.9991131,0.0001139908,0.0002313825,0.0001613142,0.0001686923,0.0002115043],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001390914,0.00009768172,0.06560968,0.000005799156,0.00006449669,0.00009488139,0.0003953411,0.000007317071,0.9328368,0.000002557835,0.0003368286,0.0004095228],"study_design_scores_gemma":[0.0008300581,0.0007550778,0.9622083,0.00005732423,0.0000486501,0.00002416102,0.00152809,0.00006017524,0.002149632,0.000111958,0.03156851,0.0006580325],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9806085,0.0001602739,0.000001583569,0.0003620106,0.0003334165,0.0003303281,0.0180149,0.00003553515,0.0001534742],"genre_scores_gemma":[0.9888383,0.00006812443,0.00006093517,0.001124348,0.0001342767,0.00001560089,0.009707897,0.000002932762,0.00004760769],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9306872,"threshold_uncertainty_score":0.6394305,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04105983475316925,"score_gpt":0.2169965124474752,"score_spread":0.175936677694306,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}