{"id":"W182607048","doi":"","title":"ZOMBIES IN BACTERIAL GENOMES: IDENTIFICATION AND ANALYSIS OF PREVIOUSLY VIRULENT PHAGE","year":2014,"lang":"en","type":"article","venue":"Scholars Commons (Wilfrid Laurier University)","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Virulence; Genome; Identification (biology); Biology; Genetics; Bacterial genome size; Computational biology; Microbiology; Virology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002575066,0.0001095987,0.0002239731,0.0003924092,0.0001306051,0.00005668828,0.0002460869,0.00005974236,0.0009741419],"category_scores_gemma":[0.00002363283,0.0001236015,0.00009185068,0.0009505318,0.0001685469,0.0006493899,0.0002313036,0.0001496702,0.00003425983],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001331653,"about_ca_system_score_gemma":0.000008063796,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004454195,"about_ca_topic_score_gemma":0.004080421,"domain_scores_codex":[0.9990994,0.0001611742,0.0002044381,0.0002695153,0.00009484441,0.0001706373],"domain_scores_gemma":[0.9994256,0.00004638046,0.0001315829,0.0003036117,0.00001371655,0.00007913997],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001358489,0.0003614824,0.2141282,0.00002171938,0.0003716437,0.00001573309,0.001887225,0.000404521,0.7676703,0.001061225,0.0003648299,0.01357726],"study_design_scores_gemma":[0.0005404281,0.00005297149,0.8807925,0.00001792483,0.0004504746,0.0000023497,0.0002551934,0.0003840934,0.005084963,0.00004348347,0.1121734,0.0002021942],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957461,0.00002666234,0.0003142758,0.0001143246,0.0000901251,0.0001265642,0.00004818232,0.00001708954,0.003516619],"genre_scores_gemma":[0.9979886,0.00009048818,0.0002629504,0.00002566177,0.00000774437,7.849453e-7,0.00004651456,0.000006837268,0.001570389],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7625853,"threshold_uncertainty_score":0.9999391,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007540203215745506,"score_gpt":0.2051943782028458,"score_spread":0.1976541749871003,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}