{"id":"W1827379041","doi":"10.1002/cyto.a.22690","title":"<scp>ISAC</scp>'s <scp>G</scp>ating‐<scp>ML</scp> 2.0 data exchange standard for gating description","year":2015,"lang":"en","type":"article","venue":"Cytometry Part A","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Institute of Biomedical Imaging and Bioengineering","keywords":"Gating; Computer science; Interoperability; Bottleneck; Software; Implementation; Software deployment; Software engineering; Embedded system; Operating system; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01138039,0.001413268,0.001121422,0.004223646,0.001916642,0.005954131,0.004485121,0.004057664,0.1435306],"category_scores_gemma":[0.02728803,0.001425351,0.001476433,0.004304157,0.001855765,0.004430918,0.0037763,0.006005514,0.1979256],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00377708,"about_ca_system_score_gemma":0.006834062,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009538415,"about_ca_topic_score_gemma":0.00708545,"domain_scores_codex":[0.9933323,0.001306161,0.0009229292,0.0005299426,0.003189785,0.0007188692],"domain_scores_gemma":[0.9628427,0.007394066,0.001862223,0.01128649,0.01484667,0.001767868],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000249776,0.0001007885,0.0005329952,0.0003473592,0.00001971604,0.0001616535,0.0001913263,0.0009522217,0.009769804,0.02058516,0.9008538,0.0662354],"study_design_scores_gemma":[0.00002966865,0.00004303331,0.0004732745,0.000123684,0.000007375609,0.00008524325,0.00004258025,0.001344489,0.0077193,0.004869646,0.9852133,0.00004825673],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.004095207,0.0006703606,0.4467399,0.01077625,0.006045079,0.002318809,0.09582951,0.2010776,0.2324472],"genre_scores_gemma":[0.02985322,0.001779128,0.2499699,0.01871826,0.002034663,0.004146489,0.3384134,0.09592737,0.2591576],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.1435306,"threshold_uncertainty_score":0.4801577,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1007686150259232,"score_gpt":0.3017342530245913,"score_spread":0.2009656379986681,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}