{"id":"W1830847181","doi":"10.1111/tan.12051","title":"<scp>HLA</scp> class I associations with rates of <scp>HIV</scp>‐1 seroconversion and disease progression in the Pumwani Sex Worker Cohort","year":2013,"lang":"en","type":"article","venue":"Tissue Antigens","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Canadian Science Centre for Human and Animal Health","funders":"","keywords":"Seroconversion; Allele; Human leukocyte antigen; Immunology; Odds ratio; Cohort; Medicine; Antigen; Biology; Internal medicine; Virology; Antibody; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005839914,0.0002077155,0.0002092289,0.0005835406,0.0004338752,0.0005665662,0.0002897343,0.000394132,0.002869002],"category_scores_gemma":[0.00161593,0.0002140557,0.000352572,0.0004824801,0.0002340044,0.0002468002,0.0003517421,0.0006916078,0.0002331901],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001406576,"about_ca_system_score_gemma":0.000245767,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008268524,"about_ca_topic_score_gemma":0.006473044,"domain_scores_codex":[0.9997397,0.00006167092,0.00001749444,0.00007305076,0.00005115664,0.00005692282],"domain_scores_gemma":[0.998898,0.0001661115,0.000433137,0.0001408758,0.00009544866,0.0002663286],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001033938,0.0000153951,0.9985797,0.000002623583,0.00003618223,0.00004798457,0.00005014646,0.00002102112,0.0002279085,0.00001472585,0.0001143368,0.0007866472],"study_design_scores_gemma":[0.000003990461,0.00005199357,0.9993487,0.000002789156,0.00002078084,0.000180431,0.00006529643,0.0001667853,0.00003604747,0.00001216548,0.0001089828,0.000001909879],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993913,0.00007362908,0.00003415793,0.00003370226,0.000004912387,0.000002585115,0.0001262669,0.000003490038,0.0003299298],"genre_scores_gemma":[0.9995771,0.00003230299,0.00002186013,0.00001060168,0.000006203061,0.000003026762,0.0001298767,0.000001812663,0.0002172661],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008268524,"threshold_uncertainty_score":0.01644081,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01232917801885515,"score_gpt":0.2725515635897701,"score_spread":0.2602223855709149,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}