{"id":"W1832784998","doi":"10.1111/mpp.12228","title":"Rapid identification of the <i> <scp>L</scp> eptosphaeria maculans </i> avirulence gene <i> <scp>AvrLm2</scp> </i> using an intraspecific comparative genomics approach","year":2014,"lang":"en","type":"article","venue":"Molecular Plant Pathology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":114,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Manitoba; Agriculture and Agri-Food Canada","funders":"South Carolina Department of Commerce; Western Grains Research Foundation","keywords":"Biology; Genetics; Leptosphaeria maculans; Gene; Complementation; Genome; Virulence; Coding region; Genomics; Phenotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001041789,0.0002810168,0.0002097574,0.0003271798,0.0001322169,0.0002996821,0.0002000804,0.0002598161,0.0004929524],"category_scores_gemma":[0.0001925924,0.0001158871,0.0002134679,0.0001943039,0.0001434132,0.0001370574,0.0002569442,0.0003949979,0.0003479271],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002129751,"about_ca_system_score_gemma":0.0001307364,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006607109,"about_ca_topic_score_gemma":0.0009920752,"domain_scores_codex":[0.9998991,0.00001305902,0.000005822553,0.00003431477,0.00003113535,0.0000165553],"domain_scores_gemma":[0.999854,0.00003444939,0.00004746224,0.00001736799,0.00002125785,0.00002552825],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001589399,0.000005239134,0.0002051412,0.00000955008,0.000001292316,0.00002241481,0.000008229928,0.00001370132,0.9991067,0.00001361635,0.000008020275,0.0005901456],"study_design_scores_gemma":[0.00002505152,0.0003027013,0.05592528,0.00001229074,0.00003898806,0.001112434,0.0001022496,0.001742349,0.9357167,0.00009235239,0.004916823,0.00001269034],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897859,0.0004611914,0.008078419,0.00007020051,0.000008213671,0.00004921374,0.0007321467,0.00009377799,0.0007208423],"genre_scores_gemma":[0.9777697,0.0003626299,0.01573122,0.0000813592,0.00001130348,0.00004503472,0.004505416,0.00006244788,0.001430897],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006607109,"threshold_uncertainty_score":0.001649141,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03289874602976745,"score_gpt":0.2252094443363576,"score_spread":0.1923106983065901,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}