{"id":"W1841498532","doi":"10.1111/mmi.12289","title":"A deletion in the <scp><i>wapB</i></scp> promoter in many serotypes of <i>Pseudomonas aeruginosa</i> accounts for the lack of a terminal glucose residue in the core oligosaccharide and resistance to killing by <scp>R</scp>3‐pyocin","year":2013,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"Biology; Pseudomonas aeruginosa; Random hexamer; Virulence; Operon; Bacteriocin; Oligosaccharide; Microbiology; Virulence factor; Lipid A; Plasmid; Sigma factor; Bacteria; Biochemistry; Genetics; RNA; Escherichia coli; Gene; RNA polymerase","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001450028,0.0005994673,0.0002858246,0.0002633661,0.0001531633,0.0003224442,0.0004165586,0.0003810679,0.0009525965],"category_scores_gemma":[0.0003264445,0.0002745662,0.0006445079,0.0002499529,0.0004852328,0.0001826485,0.0004143317,0.001380369,0.0006710613],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003568907,"about_ca_system_score_gemma":0.0004461425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001382412,"about_ca_topic_score_gemma":0.001473138,"domain_scores_codex":[0.9996431,0.00005696282,0.00004347818,0.00007467669,0.0001068962,0.00007484638],"domain_scores_gemma":[0.9995784,0.0001012077,0.000161378,0.0000762007,0.00002564731,0.00005723876],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004091045,0.00002256464,0.0002135242,0.00002202107,0.000004169019,0.00004785444,0.00001427491,0.0000376616,0.9989811,0.00005067516,0.0000123607,0.0005527835],"study_design_scores_gemma":[0.00001470536,0.0002143324,0.008693953,0.00002315542,0.00003551323,0.0007191377,0.00006220752,0.0007990077,0.986937,0.00004884289,0.002437885,0.0000142495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9853345,0.0004473299,0.01193915,0.0001363002,0.00004850862,0.00007145151,0.0009037496,0.0001778897,0.0009410432],"genre_scores_gemma":[0.9877708,0.00030205,0.007455742,0.0001188476,0.00001734004,0.00008467919,0.002644777,0.0001086202,0.001497151],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001382412,"threshold_uncertainty_score":0.003186762,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01218582350075979,"score_gpt":0.2455904727532411,"score_spread":0.2334046492524813,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}