{"id":"W1841656014","doi":"10.1043/0363-6445-26.3.487","title":"Phylogenetic Relationships in the Caesalpinioideae (Leguminosae) as Inferred from Chloroplast trnL Intron Sequences","year":2009,"lang":"en","type":"article","venue":"BioOne Complete (BioOne)","topic":"Plant Diversity and Evolution","field":"Agricultural and Biological Sciences","cited_by":174,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Danish International Development Agency","keywords":"Caesalpinioideae; Monophyly; Biology; Synapomorphy; Sister group; Botany; Phylogenetic tree; Clade; Evolutionary biology; Fabaceae; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003457095,0.0002204074,0.0002388703,0.00003831683,0.000507011,0.0001147814,0.0005729424,0.0001711061,0.0002487252],"category_scores_gemma":[0.0001128364,0.00009468294,0.00009335383,0.0005167087,0.0001295079,0.0001957853,0.0000645061,0.0003075237,0.0004900716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005886,"about_ca_system_score_gemma":0.00001884383,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004127854,"about_ca_topic_score_gemma":0.005887105,"domain_scores_codex":[0.9982302,0.0003199099,0.0003091621,0.0004061356,0.0003335034,0.0004011237],"domain_scores_gemma":[0.9991669,0.0004391139,0.0001289288,0.0001256742,0.00004392515,0.00009545344],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003848381,0.0005597367,0.2079688,0.000009465991,0.00004973245,0.00009217249,0.002096006,0.0001072463,0.7441653,0.004100834,0.009949171,0.03051662],"study_design_scores_gemma":[0.0002818967,0.0002916651,0.9746873,0.00003915692,0.00001821481,0.00002019051,0.000874326,0.000219277,0.0005023381,0.003004484,0.01978756,0.0002735736],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911932,0.0003990438,0.000007521155,0.006265144,0.0001527136,0.0002803867,0.0003734447,0.00007396615,0.001254584],"genre_scores_gemma":[0.9977096,0.00009770566,0.00009080319,0.0008097967,0.0003373689,0.000006108137,0.0008659139,8.841683e-7,0.00008177503],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7667184,"threshold_uncertainty_score":0.6299042,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.3113973897021658,"score_gpt":0.2226383458614436,"score_spread":0.08875904384072222,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}