{"id":"W1855521720","doi":"10.1128/genomea.00186-15","title":"Genome Sequence of an Alphabaculovirus Isolated from the Oak Looper, <i>Lambdina fiscellaria,</i> Contains a Putative 2-Kilobase-Pair Transposable Element Encoding a Transposase and a FLYWCH Domain-Containing Protein","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Transposase; Transposable element; Biology; Insertion sequence; Genetics; Transposition (logic); Genome; Whole genome sequencing; Sequence (biology); Gene; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008172941,0.0002298299,0.00019192,0.0004097186,0.0003284837,0.0002175005,0.0001165883,0.0002073306,0.001652494],"category_scores_gemma":[0.0001374056,0.00007801753,0.0003331059,0.0003874011,0.0001056401,0.0001215125,0.0001029727,0.0004521751,0.0005845254],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003894941,"about_ca_system_score_gemma":0.0003822542,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004526244,"about_ca_topic_score_gemma":0.00428856,"domain_scores_codex":[0.9999567,0.000004043688,0.00000310132,0.00001751251,0.00001183125,0.000006801436],"domain_scores_gemma":[0.9998795,0.00003274689,0.00002726782,0.000007833392,0.00002006802,0.0000326196],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001789435,0.00002872691,0.001648184,0.00007530173,0.0000100082,0.0001824549,0.00009198784,0.00006674513,0.9936001,0.0001302945,0.0001713233,0.003816015],"study_design_scores_gemma":[0.0001393417,0.0009087836,0.4828651,0.0001254958,0.0003457691,0.002985077,0.0005653816,0.002512696,0.4375263,0.0005166105,0.07145179,0.00005768597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9700155,0.0009821804,0.005528985,0.0001943035,0.00007514994,0.0001004229,0.01876786,0.0001458873,0.004189701],"genre_scores_gemma":[0.8345717,0.001142959,0.01504076,0.0002532758,0.00004435776,0.00007732744,0.1372418,0.00009452687,0.01153333],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004526244,"threshold_uncertainty_score":0.008999825,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06400772799864544,"score_gpt":0.2692655892017723,"score_spread":0.2052578612031269,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}