{"id":"W1864912592","doi":"10.1183/13993003/erj.44.suppl_58.p4773","title":"Late-breaking abstract: Genapha/dbASM: Investigating allele-specific methylation (ASM) and associations to common complex diseases","year":2014,"lang":"en","type":"article","venue":"European Respiratory Journal","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"dbSNP; International HapMap Project; Single-nucleotide polymorphism; Genome-wide association study; SNP; Genetics; Population; DNA methylation; Methylation; Tag SNP; Computational biology; Biology; Genetic association; Genotype; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004298422,0.001621183,0.001603162,0.003422395,0.001040521,0.00431696,0.003866242,0.001444003,0.09388314],"category_scores_gemma":[0.007819758,0.0008277805,0.001193132,0.004552355,0.0004699646,0.001685493,0.003490343,0.002040788,0.0441924],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008218858,"about_ca_system_score_gemma":0.003415349,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006301002,"about_ca_topic_score_gemma":0.01186645,"domain_scores_codex":[0.9982499,0.0003355323,0.0001602187,0.0004737857,0.000619992,0.0001605329],"domain_scores_gemma":[0.9923637,0.002056093,0.0004837191,0.001299133,0.001712863,0.002084527],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0008706665,0.0001105404,0.009938981,0.001120198,0.0001863558,0.0001891638,0.00009217324,0.0003426953,0.00613172,0.001341211,0.8976439,0.08203238],"study_design_scores_gemma":[0.000691546,0.0003218089,0.05279458,0.0006115272,0.0004155408,0.001381295,0.0001807551,0.003743069,0.01514407,0.00860846,0.9159449,0.0001625184],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.0198416,0.007478048,0.04478917,0.01565482,0.00538154,0.0008349755,0.8305501,0.03765076,0.03781892],"genre_scores_gemma":[0.03819788,0.003266483,0.06117633,0.006415508,0.00288859,0.001127736,0.8227015,0.008392731,0.05583326],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.09388314,"threshold_uncertainty_score":0.3140704,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04990882173749114,"score_gpt":0.2920596552551205,"score_spread":0.2421508335176293,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}