{"id":"W1870092137","doi":"10.4049/jimmunol.1101726","title":"Structural Basis of Diverse Peptide Accommodation by the Rhesus Macaque MHC Class I Molecule Mamu-B*17: Insights into Immune Protection from Simian Immunodeficiency Virus","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Chinese Academy of Sciences","keywords":"Epitope; Simian immunodeficiency virus; MHC class I; Peptide; Biology; Major histocompatibility complex; C-terminus; CD8; HLA-B; Human immunodeficiency virus (HIV); Virology; Immune system; Chemistry; Antibody; Human leukocyte antigen; Amino acid; Antigen; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006792774,0.0002221506,0.00022218,0.00008527988,0.0002315157,0.0002751466,0.0002651375,0.0002109122,0.001126845],"category_scores_gemma":[0.0001154819,0.0001190256,0.0001601848,0.00008727649,0.000204472,0.0001766292,0.000243224,0.0004495648,0.0002883548],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000314827,"about_ca_system_score_gemma":0.0002453045,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001192402,"about_ca_topic_score_gemma":0.001149065,"domain_scores_codex":[0.9999617,0.00000564321,0.000001912945,0.00000768502,0.000009445454,0.00001366946],"domain_scores_gemma":[0.9999645,0.000004706479,0.00001083895,0.000002524262,0.000003822081,0.00001361203],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003038091,0.00005389156,0.004623331,0.0001114095,0.00003299277,0.0009810579,0.0002097161,0.002996611,0.9863473,0.001090243,0.0001916284,0.003057963],"study_design_scores_gemma":[0.0004399641,0.001584392,0.120716,0.0001588257,0.0002592941,0.005617694,0.001768346,0.08339825,0.7563941,0.003286874,0.0262563,0.0001199542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983121,0.0005152193,0.000414649,0.00003997925,0.000004758761,0.000004568759,0.00003908014,0.00001449288,0.0006550821],"genre_scores_gemma":[0.9985892,0.0003793672,0.0006174909,0.00004043628,0.000003338281,0.000006610068,0.0001405025,0.000007188949,0.0002158957],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001192402,"threshold_uncertainty_score":0.003769696,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02277367943178184,"score_gpt":0.2395626398519002,"score_spread":0.2167889604201184,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}