{"id":"W1873165610","doi":"10.4049/jimmunol.1002952","title":"Immunization with Live and Dead <i>Chlamydia muridarum</i> Induces Different Levels of Protective Immunity in a Murine Genital Tract Model: Correlation with MHC Class II Peptide Presentation and Multifunctional Th1 Cells","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Biology; Immunology; MHC class II; MHC class I; Effector; Virology; Immunity; Epitope; Immunization; Chlamydia trachomatis; T cell; Antibody; Immune system; Major histocompatibility complex","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007268586,0.0002058286,0.0003701083,0.0003837241,0.0002767455,0.000009349091,0.0001801879,0.000193069,0.00007939056],"category_scores_gemma":[0.0001357155,0.0001249234,0.0000368782,0.0002234641,0.0008762634,0.0004530494,0.000120665,0.001119764,0.000002825903],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008748902,"about_ca_system_score_gemma":0.0001538089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005955449,"about_ca_topic_score_gemma":0.0001564726,"domain_scores_codex":[0.9981018,0.0008848097,0.0005003692,0.0001811445,0.00009901476,0.0002328467],"domain_scores_gemma":[0.9981182,0.0003867066,0.0006480956,0.0002420285,0.0005863113,0.00001862694],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.007477229,0.001041848,0.02580978,0.00002698312,0.0007282158,0.00000542574,0.01662835,0.002255257,0.9429002,0.0001389007,0.000004497292,0.002983294],"study_design_scores_gemma":[0.002882128,0.003172314,0.740302,0.00008283671,0.0001206247,0.001212694,0.003250118,0.0002324119,0.248243,0.000364172,0.000003593804,0.0001340764],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940165,0.00108203,0.003912539,0.00007898121,0.0001052857,0.0006363797,0.00001576068,0.000009904007,0.000142582],"genre_scores_gemma":[0.9992042,0.0003077905,0.0002997994,0.000005821899,0.00001347096,0.00002214905,0.000008821087,0.00001962595,0.0001182911],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7144923,"threshold_uncertainty_score":0.5094231,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02815083097463904,"score_gpt":0.2457743323022803,"score_spread":0.2176235013276412,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}