{"id":"W1879906875","doi":"10.3389/fmicb.2015.01092","title":"The effect of diet and host genotype on ceca microbiota of Japanese quail fed a cholesterol enriched diet","year":2015,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"China Agricultural University; Chinese Academy of Agricultural Sciences; China Scholarship Council; Agriculture and Agri-Food Canada; University of Hong Kong; British Columbia Ministry of Agriculture and Lands","keywords":"Lachnospiraceae; Biology; Cholesterol; Bacteroidetes; Lactobacillus; Firmicutes; Quail; Lactobacillaceae; Microbiology; Gut flora; Food science; Bacteria; 16S ribosomal RNA; Biochemistry; Genetics; Fermentation; Endocrinology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002127567,0.0002910377,0.0004390294,0.0003083572,0.0003112805,0.000326583,0.0001347177,0.0003651067,0.0007737258],"category_scores_gemma":[0.000278927,0.0002516101,0.0002733071,0.0001540537,0.0003922272,0.0002424891,0.0002941898,0.000539754,0.0001251006],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003388958,"about_ca_system_score_gemma":0.0003012148,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005816578,"about_ca_topic_score_gemma":0.01138756,"domain_scores_codex":[0.9997138,0.00005101277,0.00002468756,0.00009197084,0.0000435648,0.00007487152],"domain_scores_gemma":[0.9995758,0.00004161315,0.00007310667,0.00002570832,0.00006079372,0.0002229784],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002624055,0.0001748291,0.0119559,0.00004850391,0.00003524551,0.0000866653,0.000169466,0.00002430003,0.9837114,0.00002465828,0.00003670266,0.001108135],"study_design_scores_gemma":[0.00007296559,0.00585498,0.867995,0.0000207345,0.0001917213,0.0002369674,0.001048969,0.0007738305,0.1228412,0.00006324301,0.0008507789,0.00004957382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996388,0.00007759251,0.00006846549,0.00003133786,0.000005983657,0.000004842816,0.00007242632,0.000001783696,0.00009877908],"genre_scores_gemma":[0.9977654,0.0001401697,0.0003998499,0.0001170926,0.000005121994,0.0000293668,0.0002461714,0.000006686038,0.001290186],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005816578,"threshold_uncertainty_score":0.01156545,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006051866622690309,"score_gpt":0.2371184663776439,"score_spread":0.2310665997549536,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}