{"id":"W1881967296","doi":"10.1016/j.chom.2015.08.006","title":"Strain-Specific V3 and CD4 Binding Site Autologous HIV-1 Neutralizing Antibodies Select Neutralization-Resistant Viruses","year":2015,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal; McGill University","funders":"Center for AIDS Research, Duke University; National Institutes of Health; Los Alamos National Laboratory; National Institute of Allergy and Infectious Diseases; National Nuclear Security Administration; Bill and Melinda Gates Foundation; U.S. Department of Energy; Institute for Research in Biomedicine; U.S. Department of Veterans Affairs","keywords":"Neutralization; Biology; Virology; Heterologous; Antibody; Neutralizing antibody; Epitope; Virus; Immunology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002237948,0.0003334755,0.0002513324,0.0003153572,0.0002268372,0.0005676754,0.0003314413,0.0003405576,0.002505972],"category_scores_gemma":[0.000330013,0.000248921,0.0002180122,0.0001456797,0.0002115484,0.0002395059,0.0002573909,0.0005824629,0.0006640121],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002947179,"about_ca_system_score_gemma":0.0001825119,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008563803,"about_ca_topic_score_gemma":0.001752917,"domain_scores_codex":[0.9996762,0.00005018774,0.00001577559,0.00004231006,0.00006231471,0.0001532552],"domain_scores_gemma":[0.9997841,0.00008427282,0.00003102874,0.00004140345,0.0000221737,0.00003711409],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000240426,0.0001588195,0.001834674,0.000009044822,0.00001062151,0.00005918073,0.00003212955,0.0001830272,0.993238,0.0003812593,0.0001518737,0.003700912],"study_design_scores_gemma":[0.00009835991,0.001187911,0.01875898,0.000009330837,0.00004504937,0.002053379,0.0001589075,0.004058444,0.9703079,0.0003649576,0.002940929,0.00001598718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975259,0.0001486017,0.0006611089,0.00002618607,0.00001296536,0.00001933298,0.00006070175,0.00002815795,0.001517118],"genre_scores_gemma":[0.9974772,0.0000897746,0.0007530368,0.00005355546,0.0000080394,0.00000905744,0.0001358544,0.00002364171,0.001449832],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002505972,"threshold_uncertainty_score":0.008383274,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03465796947875172,"score_gpt":0.2701492503526003,"score_spread":0.2354912808738486,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}