{"id":"W1885849841","doi":"10.1093/hmg/ddv306","title":"Shared genetics underlying epidemiological association between endometriosis and ovarian cancer","year":2015,"lang":"en","type":"article","venue":"Human Molecular Genetics","topic":"Endometriosis Research and Treatment","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"ca_institutions":"Women's College Hospital; University of Toronto; University of British Columbia; Public Health Ontario; Simon Fraser University; BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre","funders":"National Center for Research Resources; Cancer Council Queensland; Cancer Council NSW; National Health and Medical Research Council; Norges Forskningsråd; Kreftforeningen; Cancer Research UK; Lon V. Smith Foundation; Francis Crick Institute; National Center for Advancing Translational Sciences; Wellcome Trust; National Cancer Institute; Helse Vest; Cancer Council South Australia; Roswell Park Alliance Foundation, Roswell Park Cancer Institute; Kræftens Bekæmpelse; California Breast Cancer Research Program; Canadian Institutes of Health Research; Wellcome; Cancer Council Tasmania; Ovarian Cancer Research Fund","keywords":"Biology; Endometriosis; Genetics; Ovarian cancer; Epidemiology; Genome-wide association study; Cancer; Bioinformatics; Single-nucleotide polymorphism; Internal medicine; Genotype; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006679922,0.0002083335,0.0004780083,0.0002764281,0.0001082151,0.00006145163,0.0001042965,0.0002054191,0.00006148918],"category_scores_gemma":[0.004253665,0.0001787553,0.000112739,0.000429747,0.00005671782,0.00002405462,0.0001271202,0.0002471561,0.00002075381],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004990903,"about_ca_system_score_gemma":0.0001253422,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008941734,"about_ca_topic_score_gemma":0.00001908229,"domain_scores_codex":[0.997929,0.0002407324,0.0003513959,0.0003798849,0.0006419353,0.0004570071],"domain_scores_gemma":[0.9979099,0.0007957298,0.0001350152,0.0002956832,0.0002662703,0.0005973724],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003541746,0.0001494355,0.9619477,0.00004748261,0.00088064,0.0001290305,0.0001227063,0.0000558815,0.01647578,0.0002172297,0.000831949,0.01910671],"study_design_scores_gemma":[0.006058083,0.001441524,0.9707595,0.00006562825,0.0006507034,0.00001623115,0.00006563308,0.0002397735,0.009620202,0.002379586,0.00838861,0.0003145591],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9817692,0.01377638,0.00161998,0.000907691,0.00004459488,0.0006145542,0.00003696183,0.0000492968,0.001181323],"genre_scores_gemma":[0.9907743,0.002087878,0.006266712,0.0003485646,0.0001293212,0.00006809606,0.0000996606,0.00003340002,0.0001920368],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01879215,"threshold_uncertainty_score":0.7289428,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1927404900572185,"score_gpt":0.4134420056381101,"score_spread":0.2207015155808915,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}