{"id":"W1892807652","doi":"10.1046/j.1365-2958.2003.03551.x","title":"Interaction between the IncHI1 plasmid R27 coupling protein and type IV secretion system: TraG associates with the coiled‐coil mating pair formation protein TrhB","year":2003,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research","keywords":"Biology; Immunoprecipitation; Plasmid; Protein–protein interaction; Transmembrane domain; Cell biology; Amino acid; Two-hybrid screening; Transmembrane protein; Biochemistry; DNA; Gene; Receptor","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004684498,0.0002210296,0.000202983,0.00004027757,0.0002571618,0.00005768015,0.0001791404,0.0003970269,0.000004267267],"category_scores_gemma":[0.000071939,0.0001356224,0.00005131746,0.0001274528,0.0001790803,0.000006998033,0.0000872832,0.0002569878,0.000005750297],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003931908,"about_ca_system_score_gemma":0.00004466359,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002176351,"about_ca_topic_score_gemma":0.00006083918,"domain_scores_codex":[0.9987811,0.0002641317,0.0002721523,0.0003313432,0.00005320458,0.0002980059],"domain_scores_gemma":[0.999293,0.00001981037,0.0002671066,0.0002791545,0.0001097223,0.00003115178],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006612104,0.00001311997,0.0002004213,0.00004409501,0.0000815375,0.000001908445,0.00005367964,0.00003712828,0.998842,0.0002112659,0.00007267917,0.0003760189],"study_design_scores_gemma":[0.0005443207,0.0006603875,0.000114385,0.00006567338,0.00005391902,0.0001141713,0.0003721968,0.0002233017,0.9800407,0.00003252689,0.0175644,0.0002140108],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951137,0.0003933,0.002629738,0.0007724501,0.00008456542,0.0008432141,0.00002152168,0.00003172339,0.0001097908],"genre_scores_gemma":[0.9989278,0.00001425381,0.0004367053,0.0001135035,0.00007106916,0.00009033229,0.0002629889,0.0000271253,0.00005622486],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01880132,"threshold_uncertainty_score":0.5530521,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005497435498826693,"score_gpt":0.1934281778525952,"score_spread":0.1879307423537685,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}