{"id":"W1894407715","doi":"10.1099/ijs.0.000207","title":"Tatumella saanichensis sp. nov., isolated from a cystic fibrosis patient","year":2015,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Victoria General Hospital; Provincial Health Services Authority; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Biology; Whole genome sequencing; Genome; Sequence analysis; Genetics; Computational biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016432,0.0007179597,0.0003867351,0.0006384456,0.0008918713,0.0006182271,0.0003198616,0.0008852923,0.0005823753],"category_scores_gemma":[0.0006749636,0.0002249693,0.0004393217,0.0008596854,0.0003005014,0.0004847493,0.0004607438,0.0004004507,0.0005244769],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002360942,"about_ca_system_score_gemma":0.000435422,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005121187,"about_ca_topic_score_gemma":0.004671353,"domain_scores_codex":[0.9997064,0.00002076432,0.00006927576,0.0001021986,0.00005437403,0.00004701594],"domain_scores_gemma":[0.999621,0.00009345078,0.00008058718,0.00004001911,0.00009805032,0.00006684258],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0009434353,0.0004104859,0.1292654,0.0009249147,0.00009257031,0.08102109,0.003189679,0.001690056,0.7253743,0.0003750214,0.002328442,0.0543847],"study_design_scores_gemma":[0.0001263617,0.001963302,0.5948216,0.0003689555,0.0004577808,0.18226,0.008148756,0.006241044,0.1686806,0.0007172738,0.03605861,0.0001556214],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9926286,0.0009670498,0.001680957,0.0003095116,0.0001363139,0.0001449573,0.002383182,0.00004159438,0.001707701],"genre_scores_gemma":[0.9887916,0.0006926528,0.006411467,0.0002842313,0.00006547883,0.00005872653,0.002621014,0.00001483374,0.001059968],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005121187,"threshold_uncertainty_score":0.0101828,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01136667937817934,"score_gpt":0.2202981913101504,"score_spread":0.208931511931971,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}