{"id":"W1896269736","doi":"10.1111/j.1574-6968.2011.02277.x","title":"Effects of nitrite on ammonia-oxidizing activity and gene regulation in three ammonia-oxidizing bacteria","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":80,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"University of Alberta","keywords":"Nitrite; Nitrosomonas europaea; Nitrite reductase; Nitrosomonas; Ammonia monooxygenase; Ammonia; Nitric oxide; Bacteria; Biochemistry; Nitrification; Cytochrome; Chemistry; Biology; Microbiology; Food science; Nitrate; Enzyme; Gene; Organic chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001476483,0.000210119,0.0002593656,0.00009509648,0.00006570914,0.000008554187,0.000130763,0.0001251689,0.00004202051],"category_scores_gemma":[0.000007385393,0.000185552,0.00005628688,0.0001209361,0.0002438974,0.0001431596,0.0001263785,0.0001282626,0.00005699724],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001106811,"about_ca_system_score_gemma":0.000003259507,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009986918,"about_ca_topic_score_gemma":0.0003975241,"domain_scores_codex":[0.9989094,0.0001257875,0.0001938739,0.0003888384,0.00004874737,0.000333412],"domain_scores_gemma":[0.9995662,0.0000693783,0.0001295853,0.0001848332,0.000002818814,0.00004720557],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001976607,0.0001079514,0.03512682,0.00001270273,0.00002744239,0.00003079459,0.0003477079,0.000007156776,0.9628958,0.000002631178,0.00003689958,0.001206495],"study_design_scores_gemma":[0.0006202283,0.00008472978,0.3800032,0.00002530824,0.00001390762,0.00001773692,0.000003001242,0.000006573596,0.6190538,0.00002900855,0.00003200714,0.000110525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992038,0.00003588307,0.00005531562,0.0001114157,0.0001371252,0.0004048495,0.000006033129,0.00002460885,0.00002094504],"genre_scores_gemma":[0.9791923,0.000008073961,0.02053277,0.0001757323,0.00002703299,0.0000186139,0.00001268381,0.00001715827,0.00001561312],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3448763,"threshold_uncertainty_score":0.756659,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01104596966004028,"score_gpt":0.1831000581530799,"score_spread":0.1720540884930397,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}