{"id":"W190514905","doi":"","title":"Thermococcus onnurineus sp. nov., a Hyperthermophilic Archaeon Isolated from a Deep-Sea Hydrothermal Vent Area at the PACMANUS Field","year":2006,"lang":"en","type":"article","venue":"Journal of Microbiology and Biotechnology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Thermococcus; Biology; Yeast extract; Hyperthermophile; Heterotroph; Hydrothermal vent; Strain (injury); 16S ribosomal RNA; Bacteria; Microbiology; Obligate anaerobe; Sulfur; Hydrothermal circulation; Chemistry; Archaea; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001549793,0.0002120781,0.0003032391,0.00007236133,0.000155572,0.000007835177,0.000322414,0.0005420345,0.00004067729],"category_scores_gemma":[0.00003237324,0.0001353555,0.0001413867,0.00006312288,0.0004453679,0.000001015876,0.0003022541,0.0002875481,0.000004315987],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001767089,"about_ca_system_score_gemma":0.00003135978,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001335222,"about_ca_topic_score_gemma":0.0006554449,"domain_scores_codex":[0.9989502,0.00008202109,0.0003699396,0.0002699647,0.00003470432,0.0002932024],"domain_scores_gemma":[0.9992725,0.00006231011,0.0002806371,0.0002907153,0.00005990922,0.00003395687],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004185294,0.00006418068,0.005132536,0.000003379999,0.0002139666,0.00003219188,0.00004356467,0.00001944774,0.9894568,0.00003569553,0.0006696521,0.003910026],"study_design_scores_gemma":[0.001330693,0.001500232,0.01301755,0.00001778572,0.00009341782,0.001792659,0.00008654092,0.00002447737,0.9271311,0.0008768147,0.05386398,0.0002647977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.972012,0.02291641,0.0001720264,0.004409623,0.0002156676,0.000139922,0.00004285651,0.000004939664,0.000086489],"genre_scores_gemma":[0.9970003,0.001895236,0.0001444814,0.0005836125,0.0002442799,0.000005288302,0.00002059673,0.00001574238,0.00009050457],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06232578,"threshold_uncertainty_score":0.5519635,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004894847314172824,"score_gpt":0.1866194219814044,"score_spread":0.1817245746672315,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}