{"id":"W1907661964","doi":"10.4049/jimmunol.178.8.5076","title":"Genome-Wide Network Analysis Reveals the Global Properties of IFN-β Immediate Transcriptional Effects in Humans","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Gene; Computational biology; Multiple sclerosis; Gene expression; DNA microarray; Biological network; Immune system; Immunology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002381218,0.0001436556,0.0001787655,0.0005598659,0.00009685211,0.0002121285,0.0001221991,0.0001886292,0.0005719624],"category_scores_gemma":[0.0007593268,0.00009284053,0.0001981615,0.0004313604,0.0001271918,0.0001569737,0.0001313973,0.0001765154,0.00008799569],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001974565,"about_ca_system_score_gemma":0.0001022841,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001869373,"about_ca_topic_score_gemma":0.002570772,"domain_scores_codex":[0.9998744,0.00003727572,0.000004058816,0.00005933931,0.00001429543,0.00001071683],"domain_scores_gemma":[0.9997639,0.000115436,0.00006431168,0.00002218465,0.00001713648,0.00001693026],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001526828,0.0001828185,0.6790753,0.0002478171,0.001329212,0.0007955044,0.000395621,0.09653953,0.08704171,0.002682967,0.003690649,0.126492],"study_design_scores_gemma":[0.00001625125,0.0001325089,0.8753681,0.00001321764,0.0001660783,0.0004431331,0.0001143509,0.1145844,0.003403643,0.003619067,0.002123261,0.00001604554],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9860793,0.0004551004,0.01132399,0.0001701966,0.000005829943,0.000008842574,0.001258075,0.00007143831,0.0006272239],"genre_scores_gemma":[0.9960027,0.0002029486,0.002360476,0.00002670544,0.000006561334,0.0000108529,0.001169292,0.000008561487,0.0002118729],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001869373,"threshold_uncertainty_score":0.003717005,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007159204412992867,"score_gpt":0.2158659022094551,"score_spread":0.2087066977964622,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}