{"id":"W1908395246","doi":"10.1371/journal.pone.0139450","title":"Candidate Gene Identification with SNP Marker-Based Fine Mapping of Anthracnose Resistance Gene Co-4 in Common Bean","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Ontario Ministry of Research and Innovation; Agriculture and Agri-Food Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Genetics; Biology; Colletotrichum lindemuthianum; Locus (genetics); Gene; Phaseolus; Single-nucleotide polymorphism; Candidate gene; Genetic linkage; Leucine-rich repeat; Population; Plant disease resistance; Genotype; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022248,0.000364337,0.000662519,0.001128211,0.0002130486,0.0003185248,0.0003931256,0.0003249088,0.001127523],"category_scores_gemma":[0.0002860255,0.000202583,0.0005717528,0.0008122648,0.0001910537,0.0000826552,0.0003269254,0.0003201764,0.0004278051],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000393827,"about_ca_system_score_gemma":0.0003230621,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002647136,"about_ca_topic_score_gemma":0.006142975,"domain_scores_codex":[0.9998072,0.00001484205,0.00001185509,0.00009119569,0.00004259274,0.00003247149],"domain_scores_gemma":[0.9997637,0.00004945602,0.00007968491,0.0000134476,0.00003058011,0.00006302297],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002376298,0.00004037616,0.005548163,0.00009055659,0.00003594282,0.0002908345,0.0000582529,0.0002262442,0.9895762,0.00004676789,0.00005142085,0.003797642],"study_design_scores_gemma":[0.0002279639,0.0007511766,0.7408717,0.00005696995,0.0005575296,0.00238812,0.0002534438,0.0104077,0.2353068,0.0002299483,0.008885454,0.00006311607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9907163,0.0004113628,0.005850092,0.00003199576,0.00001401224,0.00008197284,0.00216227,0.0001321766,0.0005998619],"genre_scores_gemma":[0.9704972,0.0003314786,0.01749201,0.00005357386,0.00001157626,0.00009140864,0.008684607,0.00006769723,0.002770457],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002647136,"threshold_uncertainty_score":0.005263507,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06206413441341668,"score_gpt":0.2250020507811888,"score_spread":0.1629379163677721,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}