{"id":"W1919886276","doi":"10.1093/femspd/ftv043","title":"<i>Chlamydia trachomatis</i>Virulence Factor CT135 is Stable<i>in vivo</i>but Highly Polymorphic<i>in vitro</i>","year":2015,"lang":"en","type":"article","venue":"Pathogens and Disease","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"National Institutes of Health","keywords":"Biology; Chlamydia trachomatis; Virulence; Serotype; Pathogen; Chlamydia; Virology; Locus (genetics); Serial passage; Microbiology; Sexually transmitted disease; Gene; Population; In vivo; In vitro; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000469845,0.0002704381,0.0003466219,0.0003182595,0.0001191152,0.00004984749,0.0001936774,0.0001660483,0.0004489888],"category_scores_gemma":[0.0004852837,0.0002505051,0.00008678219,0.0003966969,0.0002560421,0.0003053515,0.0001119266,0.0003898094,0.0003533328],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001048481,"about_ca_system_score_gemma":0.0003366751,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007572064,"about_ca_topic_score_gemma":0.0000419513,"domain_scores_codex":[0.9977548,0.0004219102,0.0003697307,0.0007085468,0.0001017822,0.0006432439],"domain_scores_gemma":[0.9988216,0.0001433257,0.00007524304,0.0005414595,0.0001145624,0.0003038188],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005918265,0.0006630015,0.1725387,0.00004945047,0.00003228018,0.0001368183,0.0005510285,0.000009734919,0.8180859,0.0001240039,0.00167431,0.005542994],"study_design_scores_gemma":[0.005421629,0.000157857,0.6789929,0.00008254274,0.00007090362,0.0001127464,0.0007006849,0.00007204264,0.2843845,0.001690463,0.02735747,0.0009562635],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9862258,0.009390824,0.0000681612,0.0005907832,0.0003262245,0.0004754018,0.001599459,0.00006080311,0.001262491],"genre_scores_gemma":[0.997142,0.0003285213,0.00006854987,0.0003108724,0.00004995975,0.000110339,0.0000521077,0.00002821539,0.001909426],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5337014,"threshold_uncertainty_score":0.9999947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02653327604100925,"score_gpt":0.2636590321439602,"score_spread":0.237125756102951,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}