{"id":"W1920849250","doi":"10.15252/embr.201540871","title":"The polymerase slips and PIPO exists","year":2015,"lang":"en","type":"letter","venue":"EMBO Reports","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":false,"ca_institutions":"York University","funders":"Biotechnology and Biological Sciences Research Council; Wellcome Trust","keywords":"Open reading frame; Genome; Biology; White (mutation); Genetics; Gene; Computational biology; Peptide sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005992058,0.0002217263,0.0002649988,0.0000071437,0.000496592,0.000201641,0.0002017737,0.0002606653,0.00006506757],"category_scores_gemma":[0.0003943445,0.00005655268,0.00007359398,0.0001198703,0.0002093064,0.00005269259,0.0002830461,0.0007049945,0.00002955134],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003064179,"about_ca_system_score_gemma":0.00002879153,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005506939,"about_ca_topic_score_gemma":0.000431935,"domain_scores_codex":[0.9980099,0.00012357,0.0002837628,0.0004292331,0.0006695345,0.000484002],"domain_scores_gemma":[0.9989538,0.0004976534,0.000206155,0.0001346852,0.0001015332,0.0001061463],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000004111363,0.000004734102,0.0001901686,0.000006633833,0.00002865016,0.003605926,0.0000167041,9.361532e-9,0.001788013,0.000001612797,0.9833326,0.0110208],"study_design_scores_gemma":[0.00001738349,0.00004739927,0.001801143,0.00002033771,0.00001009464,0.0005768594,0.00002310866,5.057352e-7,0.0001723856,0.0006322412,0.9965255,0.0001729865],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"commentary","genre_scores_codex":[0.0846284,0.01129333,3.850345e-8,0.887651,0.0008009293,0.0004593015,0.0002935377,0.0001169257,0.0147566],"genre_scores_gemma":[0.0585602,0.008152652,0.00003182131,0.6702721,0.03212569,0.0004325865,0.003246163,0.00001690672,0.2271619],"genre_candidate":"commentary","genre_consensus":"commentary","teacher_disagreement_score":0.2173788,"threshold_uncertainty_score":0.3819434,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04875827021521869,"score_gpt":0.2664376536221477,"score_spread":0.217679383406929,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}