{"id":"W1923703927","doi":"10.1038/npre.2008.1988.1","title":"Population genomics of domestic and wild yeasts","year":2008,"lang":"en","type":"preprint","venue":"Nature Precedings","topic":"Fermentation and Sensory Analysis","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Domestication; Population genomics; Outbreeding depression; Genome; Population; Evolutionary biology; Natural selection; Indel; Genome evolution; Phylogenetic tree; Genetics; Genomics; Gene; Single-nucleotide polymorphism; Genotype; Inbreeding","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008251046,0.0001278754,0.0002333523,0.00002367471,0.00006556272,0.00002582564,0.0001225447,0.0004578712,0.00005582063],"category_scores_gemma":[0.00007011324,0.00005490796,0.00009116686,0.0001221979,0.00003656324,0.0000413927,0.0001294668,0.0004337087,0.000002044787],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002596354,"about_ca_system_score_gemma":0.000004395654,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001624417,"about_ca_topic_score_gemma":0.0000755464,"domain_scores_codex":[0.9992434,0.00003079409,0.0001985116,0.0002682041,0.0001618439,0.00009729548],"domain_scores_gemma":[0.9995712,0.00007289086,0.0001931064,0.00004144059,0.00006858604,0.00005278974],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003132406,0.0002893039,0.2444272,0.0004300629,0.0004583137,0.00001906538,0.002817604,0.001041217,0.5515792,0.001781788,0.003458998,0.1933839],"study_design_scores_gemma":[0.0001367156,0.00006110995,0.9909117,0.00008784499,0.00009960868,0.0000192626,0.0001094369,0.0009694845,0.002296536,0.002634812,0.002372036,0.0003014133],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981806,0.0003994539,0.000001298955,0.0004715496,0.0001649774,0.0001322697,0.00004305677,0.0000282226,0.0005786015],"genre_scores_gemma":[0.9982364,0.0007113574,0.0003085918,0.0001437531,0.0001497799,0.000003758146,0.0002841088,8.83495e-7,0.0001613973],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7464845,"threshold_uncertainty_score":0.3531522,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01381795674426473,"score_gpt":0.249400545994144,"score_spread":0.2355825892498793,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}