{"id":"W1924901138","doi":"10.1111/omi.12145","title":"Escape from the competence state in <i>Streptococcus mutans</i> is governed by the bacterial population density","year":2015,"lang":"en","type":"article","venue":"Molecular Oral Microbiology","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Streptococcus mutans; Regulon; Biology; Horizontal gene transfer; Bacteria; Population; Genetics; Gene; Microbiology; Bacterial protein; Medicine; Phylogenetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004560662,0.0002323348,0.000326688,0.00002749657,0.0001377692,0.0000910478,0.0006647994,0.0002665191,0.0004997016],"category_scores_gemma":[0.000132359,0.0001507269,0.00009375265,0.0002444251,0.000380878,0.00008262884,0.0003187181,0.0004862386,0.0006498377],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001138451,"about_ca_system_score_gemma":0.00007775149,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01390745,"about_ca_topic_score_gemma":0.01160346,"domain_scores_codex":[0.9975169,0.001069817,0.0003565253,0.0004877988,0.00008454744,0.0004843681],"domain_scores_gemma":[0.9990231,0.0001271175,0.0001265644,0.0005376072,0.0001133319,0.00007229707],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000218311,0.00003867113,0.1472007,0.000002177656,0.00004133981,0.00008864254,0.0001826642,0.000006185016,0.8246299,0.00001827231,0.02711356,0.0004596454],"study_design_scores_gemma":[0.004792698,0.0003290919,0.3020695,0.00004830981,0.0000613313,0.00038888,0.0002485006,0.00006131078,0.5372949,0.002074957,0.1518062,0.0008242597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951631,0.0006024287,0.0001624495,0.00139319,0.0007606576,0.0004577355,0.00135776,0.00003124684,0.00007143064],"genre_scores_gemma":[0.9961053,0.00001219927,0.00008190409,0.001944177,0.00005894759,0.00002037989,0.001402031,0.00002076204,0.000354296],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.287335,"threshold_uncertainty_score":0.992659,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01692377908526899,"score_gpt":0.2666876039179074,"score_spread":0.2497638248326384,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}