{"id":"W1928078629","doi":"10.1371/journal.pone.0134824","title":"Transcriptome Analysis of the Emerald Ash Borer (EAB), Agrilus planipennis: De Novo Assembly, Functional Annotation and Comparative Analysis","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Canadian Forest Service; Natural Resources Canada; University of Guelph","funders":"Natural Resources Canada","keywords":"Agrilus; Emerald ash borer; Biology; Transcriptome; De novo transcriptome assembly; Sequence assembly; RNA-Seq; Expressed sequence tag; Gene; Genetics; Botany; PEST analysis; Fraxinus; Genome; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005846421,0.0006993262,0.0008165563,0.001056808,0.0008446657,0.0009157848,0.0004160495,0.0004486918,0.0006620134],"category_scores_gemma":[0.0006803264,0.0003133274,0.000989765,0.001438287,0.000262536,0.0004450224,0.0004975268,0.0007307708,0.0006272425],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004927645,"about_ca_system_score_gemma":0.0006049198,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001584893,"about_ca_topic_score_gemma":0.002889107,"domain_scores_codex":[0.9996824,0.00002964884,0.00002523291,0.0001319941,0.00009150524,0.0000391408],"domain_scores_gemma":[0.9996414,0.00008417743,0.000080478,0.00003130457,0.0001131767,0.00004944422],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004512572,0.00009749707,0.01042293,0.001135943,0.0001486788,0.0006065713,0.0004378208,0.003303363,0.9600669,0.0004307162,0.001076867,0.02182159],"study_design_scores_gemma":[0.0001407728,0.001064619,0.4501768,0.000442157,0.001330765,0.003368978,0.001385421,0.09410251,0.3795189,0.002546545,0.06570326,0.0002191877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9031484,0.006234151,0.05581443,0.0002566825,0.0001159951,0.0001933204,0.03111275,0.0008160412,0.002308307],"genre_scores_gemma":[0.7247276,0.00456071,0.1584588,0.0001997201,0.00007966986,0.0003706939,0.1081647,0.0006862727,0.002751839],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001584893,"threshold_uncertainty_score":0.003575265,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08263326959836405,"score_gpt":0.2397485836487548,"score_spread":0.1571153140503908,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}