{"id":"W1931417789","doi":"10.1111/hiv.12191","title":"<i><scp>S</scp>higella flexneri</i> serotype 1 infections in men who have sex with men in <scp>V</scp>ancouver, <scp>C</scp>anada","year":2015,"lang":"en","type":"article","venue":"HIV Medicine","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control; Vancouver Coastal Health; AIDS Vancouver; St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Shigellosis; Shigella flexneri; Medicine; Serotype; Men who have sex with men; Outbreak; Internal medicine; Shigella; Demography; Virology; Human immunodeficiency virus (HIV); Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001074833,0.0006036538,0.000836571,0.0003367378,0.0001742732,0.00003955776,0.0005313413,0.0003727265,0.000008311084],"category_scores_gemma":[0.00617994,0.00049258,0.00007553735,0.0009106391,0.0005692434,0.00002913282,0.0004840092,0.0007318455,0.00003743173],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002204639,"about_ca_system_score_gemma":0.0006824879,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002184469,"about_ca_topic_score_gemma":0.01060782,"domain_scores_codex":[0.9959086,0.0003679366,0.0006369057,0.0009886113,0.000908225,0.001189712],"domain_scores_gemma":[0.997213,0.0007435195,0.0002308007,0.000855287,0.0003651117,0.0005923035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002641642,0.0002883851,0.08377811,0.0001262589,0.0002099816,0.0001666917,0.00344667,0.0004270712,0.04518379,0.00004307831,0.8660683,0.0002352462],"study_design_scores_gemma":[0.008682931,0.002684636,0.01147966,0.0003596977,0.0001000838,0.00008270666,0.03061582,0.001823216,0.03048714,0.0002125689,0.9132858,0.0001857107],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7047198,0.004699924,0.0002398595,0.000732462,0.000187282,0.001040794,0.00003946319,0.00006784782,0.2882726],"genre_scores_gemma":[0.8457137,0.005051853,0.0003807034,0.001762001,0.001501908,0.0006289546,0.0003091964,0.0002021936,0.1444494],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1438231,"threshold_uncertainty_score":0.9997526,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01455323389924094,"score_gpt":0.2675387174912816,"score_spread":0.2529854835920406,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}