{"id":"W1931450175","doi":"10.1164/rccm.201502-0223oc","title":"Host Response to the Lung Microbiome in Chronic Obstructive Pulmonary Disease","year":2015,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":257,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; St. Paul's Hospital","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Canadian Institutes of Health Research; Tula Foundation","keywords":"Microbiome; COPD; Lung; Pathology; Medicine; Immunology; Obstructive lung disease; Biology; Microbiology; Bioinformatics; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008600131,0.0002777438,0.000366429,0.0005259431,0.0002798396,0.0005954272,0.0001780399,0.000549891,0.0006601665],"category_scores_gemma":[0.001200952,0.0001240169,0.0001799962,0.0003863432,0.0006246102,0.0002405754,0.000559564,0.0003677355,0.00009024062],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002071394,"about_ca_system_score_gemma":0.0002383987,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005353744,"about_ca_topic_score_gemma":0.0005816959,"domain_scores_codex":[0.9995136,0.0001612626,0.00003448275,0.0001271231,0.0001067633,0.00005683987],"domain_scores_gemma":[0.9993298,0.00024476,0.0002430531,0.00004002722,0.00005726323,0.00008508761],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001632452,0.0002032176,0.7212759,0.0006860727,0.0002011656,0.0003684536,0.0003576447,0.001020724,0.2401284,0.0003049652,0.0003047774,0.03351619],"study_design_scores_gemma":[0.00001309292,0.0005301418,0.9882819,0.00005749607,0.00005773206,0.0007496053,0.0001921941,0.001656513,0.007362446,0.0003994702,0.000688152,0.00001126841],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946218,0.002950771,0.001348083,0.0002275225,0.00002356461,0.00002978693,0.0002603262,0.0000189841,0.0005192563],"genre_scores_gemma":[0.9975997,0.0006652341,0.001205964,0.0001229261,0.00003896029,0.00002339215,0.0001756648,0.000003046654,0.0001650522],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008600131,"threshold_uncertainty_score":0.004548252,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01258094137286133,"score_gpt":0.3157402652981212,"score_spread":0.3031593239252598,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}