{"id":"W1931450175","doi":"10.1164/rccm.201502-0223oc","title":"Host Response to the Lung Microbiome in Chronic Obstructive Pulmonary Disease","year":2015,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":257,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; St. Paul's Hospital","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Canadian Institutes of Health Research; Tula Foundation","keywords":"Microbiome; COPD; Lung; Pathology; Medicine; Immunology; Obstructive lung disease; Biology; Microbiology; Bioinformatics; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000672298,0.0001167793,0.0002263451,0.000105174,0.0000566042,0.000008566997,0.0001598181,0.00003553551,0.000006322659],"category_scores_gemma":[0.0008320814,0.00007601501,0.00004101966,0.0001924195,0.0006598223,0.000006092,0.00006231504,0.0001966374,0.000001410133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001094657,"about_ca_system_score_gemma":0.0005757996,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001791942,"about_ca_topic_score_gemma":0.00001471586,"domain_scores_codex":[0.9988099,0.0003613158,0.0002879397,0.0001748613,0.0001414457,0.00022457],"domain_scores_gemma":[0.9988679,0.00008071142,0.00007551104,0.000179996,0.0002805384,0.0005153541],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.007736315,0.00005953639,0.02658639,0.0001194694,0.00002800218,0.0005433945,0.002165797,0.00001990279,0.9422687,0.0000916087,0.005048779,0.01533206],"study_design_scores_gemma":[0.002720956,0.01799442,0.5866148,0.0005265389,0.0001641089,0.000658055,0.02993755,0.000007509143,0.00525636,0.00005844936,0.3555692,0.0004920299],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9693283,0.02281146,0.0001146613,0.007417686,0.0001630627,0.00009883176,0.00001571229,0.000001722733,0.00004848598],"genre_scores_gemma":[0.9953648,0.00005147812,0.0000649889,0.003918465,0.0005685973,0.000003435542,0.000002805828,0.00001091043,0.00001447013],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9370124,"threshold_uncertainty_score":0.3099802,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01258094137286133,"score_gpt":0.3157402652981212,"score_spread":0.3031593239252598,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}