{"id":"W1935764071","doi":"10.1093/femsle/fnv153","title":"Regulation of indole-3-acetic acid biosynthesis by branched-chain amino acids in<i>Enterobacter cloacae</i>UW5","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Enterobacter cloacae; Biochemistry; Valine; Aromatic amino acids; Isoleucine; Amino acid; Indole-3-acetic acid; Regulon; Biosynthesis; Biology; Branched-chain amino acid; Enzyme; Leucine; Chemistry; Transcription factor; Escherichia coli; Auxin; Gene; Enterobacteriaceae","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003194869,0.000209292,0.0003177342,0.00004160027,0.0000468042,0.00001997413,0.0003091032,0.0002451381,0.00007539507],"category_scores_gemma":[0.00003297615,0.0001003043,0.00009620972,0.0002554573,0.0002158877,0.00008870787,0.0001010926,0.0001762514,0.00003941594],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006001824,"about_ca_system_score_gemma":0.000006831232,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007737552,"about_ca_topic_score_gemma":0.00008406662,"domain_scores_codex":[0.9986004,0.000174204,0.0003917344,0.0003711658,0.00006619575,0.0003962936],"domain_scores_gemma":[0.9995293,0.00006221513,0.0001824554,0.00009978577,0.00004037077,0.00008589768],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007436091,0.0000948891,0.0247958,0.000004934056,0.00002051107,0.000001761819,0.0001143944,0.000004240338,0.9688548,0.00001243848,0.003589562,0.002432267],"study_design_scores_gemma":[0.001055498,0.0004853389,0.1432231,0.00008011414,0.0000248745,0.00003669042,0.0001781631,0.00002547118,0.83672,0.00009265143,0.0175993,0.0004787154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938424,0.0001932285,0.00002930556,0.005201647,0.0002463548,0.00021723,0.0001484176,0.00003359606,0.00008780968],"genre_scores_gemma":[0.9974329,0.00001713964,0.0001519521,0.001883553,0.0000794896,0.00000894724,0.0003671103,0.000002534699,0.00005633835],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1321348,"threshold_uncertainty_score":0.4090291,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01395429225289974,"score_gpt":0.1894789218863931,"score_spread":0.1755246296334934,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}