{"id":"W1948385706","doi":"10.1111/jeu.12260","title":"Characterization of a Deep‐Branching Heterolobosean, <i>Pharyngomonas turkanaensis</i> n. sp., Isolated from a Non‐Hypersaline Habitat, and Ultrastructural Comparison of Cysts and Amoebae Among <i>Pharyngomonas</i> Strains","year":2015,"lang":"en","type":"article","venue":"Journal of Eukaryotic Microbiology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Biology; Flagellate; Ultrastructure; Halophile; Amoeba (genus); Salinity; Halotolerance; Zoology; Botany; Microbiology; Bacteria; Ecology; Paleontology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002500335,0.000221501,0.0006402587,0.0001058049,0.00004827038,0.00001387897,0.000216555,0.0002491675,0.000006670752],"category_scores_gemma":[0.00007819747,0.0001998818,0.0001158392,0.00008761149,0.0003674757,0.00002976713,0.0001399718,0.0002231846,4.105801e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001465162,"about_ca_system_score_gemma":0.00006661867,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000728988,"about_ca_topic_score_gemma":0.00009743384,"domain_scores_codex":[0.9985814,0.0001811494,0.0006711835,0.0002575149,0.00008488645,0.0002238808],"domain_scores_gemma":[0.9985358,0.00003704388,0.0008102962,0.00016404,0.0002829891,0.000169898],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004753776,0.00006654859,0.2868795,0.00003556667,0.000203133,0.0000103609,0.0005736382,0.00004456405,0.7113391,0.000001815659,0.00007310586,0.0002972979],"study_design_scores_gemma":[0.003072495,0.001913974,0.51867,0.00008833982,0.0002106446,0.0004251651,0.0002939629,0.0004836638,0.4744384,0.00005569633,0.00008749339,0.0002601285],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961776,0.001098199,0.001908198,0.00008014032,0.0002276865,0.0001785452,0.0003118748,0.000003291203,0.00001448557],"genre_scores_gemma":[0.9980707,0.0001463396,0.001119894,0.0001589577,0.0001300412,6.160158e-7,0.0003520299,0.00001527131,0.000006121421],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2369007,"threshold_uncertainty_score":0.8150945,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009711214317937415,"score_gpt":0.2265968519728234,"score_spread":0.216885637654886,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}