{"id":"W1949799299","doi":"10.1101/pdb.prot086280","title":"Detection of p62 on Paraffin Sections by Immunohistochemistry","year":2015,"lang":"en","type":"article","venue":"Cold Spring Harbor Protocols","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Tata Trusts; Lady Tata Memorial Trust","keywords":"Sequestosome 1; Autophagy; Autophagosome; Western blot; Immunohistochemistry; Signal transducing adaptor protein; Cell biology; Protein aggregation; Blot; Chemistry; Biology; Biochemistry; Gene; Phosphorylation; Apoptosis; Immunology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001433406,0.0001199864,0.0001977231,0.0000488237,0.00005082129,0.00001089524,0.00008438473,0.0000949814,0.00003295032],"category_scores_gemma":[0.00008431778,0.000116722,0.00008341471,0.000138027,0.00004723885,0.0000418087,0.00001763672,0.0001699713,0.00003690607],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001485651,"about_ca_system_score_gemma":0.0001423211,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002276728,"about_ca_topic_score_gemma":2.537649e-7,"domain_scores_codex":[0.9991912,0.00002195014,0.0002165242,0.0001889453,0.0002275798,0.0001537541],"domain_scores_gemma":[0.9992118,0.00001965375,0.0001088671,0.0003985739,0.0001062121,0.0001548556],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005540383,0.0003773226,0.0004445153,0.0001008764,0.00005020351,0.00000737178,0.00002576577,0.00001284323,0.9972486,0.0002750663,0.0006596797,0.0002437205],"study_design_scores_gemma":[0.002032547,0.0005502756,0.002928345,0.0002161867,0.00002355996,0.000001374826,0.000009641669,0.00007544205,0.9681811,0.00001915393,0.02585836,0.0001039632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9596629,0.0002456925,0.0007041162,0.00007534664,0.00009380661,0.03701447,0.0000112734,0.0001964445,0.001995981],"genre_scores_gemma":[0.9513406,0.000002133055,0.0001033791,0.00009484238,0.0001040464,0.04786818,0.000001005237,0.00002427355,0.0004615057],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02906744,"threshold_uncertainty_score":0.4759783,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0261393416160824,"score_gpt":0.3184564122886926,"score_spread":0.2923170706726102,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}