{"id":"W1950636151","doi":"10.1002/yea.3016","title":"Computational models reveal genotype–phenotype associations in <i>Saccharomyces cerevisiae</i>","year":2014,"lang":"en","type":"article","venue":"Yeast","topic":"Fermentation and Sensory Analysis","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fundação para a Ciência e a Tecnologia; Centro de Estudos Ambientais e Marinhos, Universidade de Aveiro; Institute of Genetics; Programa Operacional Temático Factores de Competitividade","keywords":"Biology; Microsatellite; Genetics; Allele; Saccharomyces cerevisiae; Phenotype; Genome; Genotype; Strain (injury); Phenotypic trait; Yeast; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001182166,0.0007721249,0.000885937,0.0007805917,0.000473187,0.001074719,0.0009290786,0.000950456,0.001192616],"category_scores_gemma":[0.00484526,0.0005781876,0.0009090616,0.0005420785,0.0007265398,0.0006700222,0.0007425503,0.0007071249,0.0001308398],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001032156,"about_ca_system_score_gemma":0.001302089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0190516,"about_ca_topic_score_gemma":0.01633826,"domain_scores_codex":[0.9997005,0.0001481296,0.00001511341,0.00006060622,0.00003781011,0.00003787128],"domain_scores_gemma":[0.9959577,0.003497639,0.0002291673,0.0001247382,0.0001263892,0.00006439025],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.00002811137,0.00002010202,0.001956903,0.00001176788,0.00002547043,0.0000202048,0.0000141774,0.996038,0.0001079757,0.0007060467,0.00006017911,0.001011066],"study_design_scores_gemma":[0.00000360608,0.000006877874,0.0002281707,0.000001226157,0.000005109783,0.000002488318,0.000005254287,0.9988042,0.00003746841,0.0008618707,0.00004227758,0.000001545685],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9138086,0.0002179177,0.07965957,0.000582371,0.00002820445,0.00005894237,0.0006621198,0.0004057594,0.004576504],"genre_scores_gemma":[0.9772519,0.0001166589,0.02095595,0.0001072565,0.00001355164,0.0001283641,0.0005484759,0.00004823447,0.0008297431],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0190516,"threshold_uncertainty_score":0.03788143,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02575911376782918,"score_gpt":0.2279913373434068,"score_spread":0.2022322235755776,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}