{"id":"W1951364773","doi":"10.1073/pnas.1500163112","title":"Cryptic infection of a broad taxonomic and geographic diversity of tadpoles by Perkinsea protists","year":2015,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":81,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research","funders":"European Molecular Biology Organization","keywords":"Biology; Clade; Protist; Zoology; Amphibian; Phylogenetic tree; Ecology; Lineage (genetic); Phylogenetics; Environmental DNA; Ribosomal DNA; Ribosomal RNA; Internal transcribed spacer; Evolutionary biology; Genetic diversity; Biodiversity; Genetics; Population; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005490831,0.00004687832,0.00009061822,0.00007025135,0.0001294181,0.000003497982,0.0002413527,0.00005147748,0.00002196933],"category_scores_gemma":[0.0001611331,0.00003361666,0.00003391086,0.0002664265,0.00162399,0.0003305111,0.0002402161,0.00006918341,0.000001325397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002525945,"about_ca_system_score_gemma":0.000007641635,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000353667,"about_ca_topic_score_gemma":0.000001353076,"domain_scores_codex":[0.999311,0.000006925135,0.0001555095,0.0001235286,0.0003373749,0.0000656992],"domain_scores_gemma":[0.9995623,0.00003763205,0.0003201033,0.000005305141,0.00004750786,0.00002719084],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00001424851,0.00004310757,0.8718825,0.00001195642,0.000006886687,6.162528e-10,0.0001294778,0.00002408423,0.1261446,0.001203326,0.0003678223,0.0001720082],"study_design_scores_gemma":[0.0001021948,0.00007325059,0.9406782,0.00002133241,0.000009596119,0.000003412723,0.00005512544,0.0001877213,0.05284193,0.005809295,0.0001829545,0.00003501461],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961675,0.00004994346,0.000001133978,0.0002757289,0.00001181748,0.0001154966,0.00001401996,0.000002806547,0.003361532],"genre_scores_gemma":[0.9996063,0.00002994806,0.0002687333,0.00002679251,0.000006366936,0.000003525231,9.850591e-8,7.650605e-7,0.0000574298],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07330267,"threshold_uncertainty_score":0.598366,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04244558494112993,"score_gpt":0.3144268776185088,"score_spread":0.2719812926773789,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}