{"id":"W1959364774","doi":"10.1002/ijc.29196","title":"Methylation of viral and host genes and severity of cervical lesions associated with human papillomavirus type 16","year":2014,"lang":"en","type":"article","venue":"International Journal of Cancer","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University","funders":"Canadian Institutes of Health Research; Cancer Research UK; Suomen Lääketieteen Säätiö; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Methylation; CpG site; DNA methylation; Cervical intraepithelial neoplasia; Cancer; Oncology; Cervical cancer; Odds ratio; Bisulfite sequencing; Biology; Gene; Medicine; Internal medicine; Cancer research; Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002462972,0.00005466446,0.000217819,0.0001016947,0.00002026132,0.000008550952,0.00006591625,0.00004371345,0.0004475778],"category_scores_gemma":[0.0001127002,0.00003854689,0.00003591805,0.00006203449,0.0001096089,0.0000698904,0.00003237478,0.0001351477,1.655653e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008138199,"about_ca_system_score_gemma":0.00009898311,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003212042,"about_ca_topic_score_gemma":0.0003554879,"domain_scores_codex":[0.9990829,0.00004144976,0.0002499163,0.00006631896,0.0004943273,0.00006506592],"domain_scores_gemma":[0.9985286,0.00009189127,0.0002085943,0.00004316793,0.001051738,0.00007600306],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002251263,0.0002167981,0.7893845,0.0001015132,0.0008681506,0.00001116676,0.0002667766,0.00001821915,0.05154968,0.001281935,0.0001853658,0.1538646],"study_design_scores_gemma":[0.002016525,0.000608023,0.9838642,0.0001252271,0.00009330254,0.00001762389,0.00002747774,0.0001356038,0.01164017,0.0005468226,0.0008827535,0.00004225521],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961917,0.001636278,0.0001563669,0.0007166445,0.00008669927,0.00004775756,0.00001538903,0.000002066157,0.001147134],"genre_scores_gemma":[0.9989238,0.0006476236,0.00007076858,0.00009971757,0.0001738815,9.099779e-7,0.000003563055,0.000006209027,0.00007351712],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1944797,"threshold_uncertainty_score":0.4900663,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03424960000547199,"score_gpt":0.383431134858748,"score_spread":0.349181534853276,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}