{"id":"W1963496433","doi":"10.1007/s11295-011-0392-4","title":"Range-wide chloroplast and mitochondrial DNA imprints reveal multiple lineages and complex biogeographic history for Douglas-fir","year":2011,"lang":"en","type":"article","venue":"Tree Genetics & Genomes","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"ca_institutions":"Natural Resources Canada; Government of British Columbia; Université Laval","funders":"Canadian Forest Service; U.S. Forest Service; Consejo Nacional de Ciencia y Tecnología; National Natural Science Foundation of China; Canada Research Chairs; Ministère du Développement Économique, de l’Innovation et de l’Exportation","keywords":"Range (aeronautics); Biology; Refugium (fishkeeping); Lineage (genetic); Ecology; Population; Genetic diversity; Phylogeography; Gene flow; Genetic structure; Evolutionary biology; Habitat; Phylogenetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007461257,0.0002402377,0.0002224878,0.0000925373,0.0001389143,0.0000206833,0.0001824893,0.0002116379,0.00005061601],"category_scores_gemma":[0.00003484111,0.0002470479,0.00009908654,0.00004651871,0.0002495266,0.000004193689,0.0001892922,0.00006732283,0.000003510014],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001178134,"about_ca_system_score_gemma":0.0000366756,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004156469,"about_ca_topic_score_gemma":0.0003156775,"domain_scores_codex":[0.9988679,0.00003907912,0.000230967,0.0004732151,0.0001064047,0.0002824921],"domain_scores_gemma":[0.9992869,0.00002843709,0.0001126665,0.0003175055,0.00009470288,0.0001598229],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007724331,0.00008757508,0.6174944,0.0001284891,0.0002825434,0.000004525927,0.001350866,0.00001948536,0.3538541,0.00005933534,0.009084295,0.01686194],"study_design_scores_gemma":[0.002661291,0.000448655,0.6938094,0.000006876634,0.0001225181,0.0000169207,0.0001445701,0.00007169098,0.01574695,0.0002374218,0.286308,0.0004256937],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9899029,0.007845126,0.0006629284,0.00004928451,0.0006720276,0.0004311754,0.0001306855,0.00001789722,0.0002879323],"genre_scores_gemma":[0.9773413,0.001414979,0.01959807,0.0002251355,0.0004300695,0.00002073578,0.0002295429,0.00003097657,0.0007091964],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3381071,"threshold_uncertainty_score":0.9999982,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03440753696324909,"score_gpt":0.2193115194787772,"score_spread":0.1849039825155281,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}