{"id":"W1963627601","doi":"10.1007/978-94-011-4309-7_46","title":"Duplication, Rearrangement, and Reconciliation","year":2000,"lang":"en","type":"book-chapter","venue":"Computational biology","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Gene duplication; Phylogenetic tree; Genome; Breakpoint; Gene; Genetics; Biology; Sequence (biology); Tree (set theory); Gene family; Computational biology; Evolutionary biology; Combinatorics; Mathematics; Chromosome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001419408,0.001010463,0.001294153,0.00181192,0.0008780407,0.003381743,0.003152254,0.001434996,0.006706188],"category_scores_gemma":[0.005062513,0.000772783,0.001099847,0.004191869,0.003295425,0.007433465,0.002067763,0.002355224,0.002740143],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00118156,"about_ca_system_score_gemma":0.001311402,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001180002,"about_ca_topic_score_gemma":0.001762644,"domain_scores_codex":[0.999158,0.000230905,0.0000399392,0.0002994215,0.0002071182,0.00006456378],"domain_scores_gemma":[0.9984998,0.0009592824,0.00007735522,0.0003133885,0.0001011282,0.00004905008],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.00009951975,0.00003766581,0.0006936191,0.0004186156,0.00006364194,0.0001036051,0.0001905213,0.037795,0.001574673,0.5129042,0.02027024,0.4258487],"study_design_scores_gemma":[0.00001908181,0.00001823078,0.0002570165,0.0000685356,0.00003045672,0.0003327976,0.00008992988,0.1004219,0.002309191,0.852185,0.0442409,0.00002709595],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.008005528,0.01128831,0.9484203,0.001582107,0.0004537837,0.00007735488,0.0003766014,0.001770346,0.02802566],"genre_scores_gemma":[0.1689306,0.01591323,0.7851871,0.0005619106,0.0006260692,0.0003086357,0.001839911,0.000955135,0.02567734],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.006706188,"threshold_uncertainty_score":0.02243441,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01505957026693104,"score_gpt":0.2445813760675773,"score_spread":0.2295218058006463,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}