{"id":"W1963642555","doi":"10.1128/jcm.44.3.1141-1144.2006","title":"Novel Multiplex PCR Assay for Detection of the Staphylococcal Virulence Marker Panton-Valentine Leukocidin Genes and Simultaneous Discrimination of Methicillin-Susceptible from -Resistant Staphylococci","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":405,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Panton–Valentine leukocidin; Leukocidin; Virulence; Multiplex; Microbiology; Staphylococcus aureus; Multiplex polymerase chain reaction; Biology; Virology; Staphylococcal infections; Micrococcaceae; Gene; Methicillin-resistant Staphylococcus aureus; Polymerase chain reaction; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00242798,0.0002920966,0.001383191,0.0001765352,0.0001007852,0.00001307185,0.0003118358,0.0005182863,0.00002784949],"category_scores_gemma":[0.003759765,0.0001951397,0.0007743577,0.0002404965,0.001008659,0.00008382366,0.0001124226,0.0006333126,7.937122e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007445159,"about_ca_system_score_gemma":0.0002743504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002939875,"about_ca_topic_score_gemma":0.000697529,"domain_scores_codex":[0.9957826,0.00038056,0.002879793,0.000398635,0.0002095157,0.0003488722],"domain_scores_gemma":[0.9898489,0.005446784,0.002886998,0.0003659245,0.001344186,0.0001072757],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005535212,0.0006495537,0.01926744,0.0002529848,0.0002692788,0.000006274762,0.00004531549,0.0001442647,0.964545,0.00006174813,0.0001474303,0.009075516],"study_design_scores_gemma":[0.007297626,0.002449517,0.1329736,0.0007453526,0.0008285466,0.00005756048,0.0002448514,0.0009638218,0.8477724,0.0005159138,0.005865479,0.0002853037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9657022,0.001457755,0.03040349,0.0004219316,0.0006841864,0.0007249104,0.000558125,0.000009207072,0.00003820137],"genre_scores_gemma":[0.9865288,0.0004429969,0.01228583,0.0001191189,0.0004176543,0.000005605417,0.00002309223,0.00003470476,0.0001422593],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1167725,"threshold_uncertainty_score":0.7957566,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04014701238457586,"score_gpt":0.3344801935556846,"score_spread":0.2943331811711088,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}