{"id":"W1963781467","doi":"10.1016/j.virusres.2014.07.011","title":"Human APOBEC3F incorporation into human immunodeficiency virus type 1 particles","year":2014,"lang":"en","type":"article","venue":"Virus Research","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"ca_institutions":"Royal Victoria Hospital; McGill University Health Centre; Royal Victoria Regional Health Centre; Jewish General Hospital","funders":"National Key Research and Development Program of China","keywords":"APOBEC3G; Cytidine deaminase; Biology; Linker; Zinc finger; Function (biology); Cytidine; Integrase; Peptide sequence; Sequence (biology); Mechanism (biology); Amino acid; Cell biology; Virology; Computational biology; Human immunodeficiency virus (HIV); Genetics; Biochemistry; DNA; Enzyme; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003859767,0.0002359556,0.0001792734,0.000431562,0.00055851,0.0007155648,0.0004097264,0.000469854,0.001947447],"category_scores_gemma":[0.0005984281,0.0002379261,0.0002637714,0.0002544192,0.0003700155,0.0003739833,0.0002020522,0.0006580057,0.000495513],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001180194,"about_ca_system_score_gemma":0.0006556535,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01315513,"about_ca_topic_score_gemma":0.01235085,"domain_scores_codex":[0.9998009,0.00004509507,0.000008288287,0.00004115487,0.00004746103,0.00005709332],"domain_scores_gemma":[0.9997575,0.0001217225,0.00002068064,0.00003031893,0.00003540864,0.00003440191],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001239485,0.00007843116,0.0008622463,0.00008479047,0.00002650299,0.0001639559,0.0001739268,0.0006324304,0.9816705,0.001666125,0.0002931945,0.01310847],"study_design_scores_gemma":[0.00003753551,0.0002855705,0.002486079,0.00001359938,0.00002872694,0.0001341347,0.00004729595,0.001886604,0.9910384,0.0001713685,0.003858638,0.00001197981],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9860984,0.002086707,0.00450481,0.0001076764,0.0001369051,0.00003516223,0.0002692794,0.0001061132,0.006654811],"genre_scores_gemma":[0.9867626,0.0006657753,0.004074187,0.00005112425,0.00002244385,0.00001173947,0.0004000958,0.00007749206,0.007934521],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01315513,"threshold_uncertainty_score":0.02615714,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08505218207473725,"score_gpt":0.3939540837215105,"score_spread":0.3089019016467733,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}